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Name : katA (HPP12_0875) Accession : YP_002301507.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 922979 - 924496 bp Length : 1518 bp Strand : - Note : - DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGACAACAATGTGATTACGGCTGGTCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGGATCCCTGAAAGGG TGGTGCATGCTAAAGGAAGCGGGGCTTATGGCACTTTCACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACAGAATGCTTTTTCAGATTTTCTACTGTGGCTGGTGAAAGAGGCAGTGCGGATGCGGT AAGAGACCCAAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTGGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTTATCCACACTCAAAAACGAGATCCTCAAACCAATTTGCCTAACCAC GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGCTTATACCAAGTAACATGGGTTATGAGCGATAGAGGTATTCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGTCTTATCAACGCTAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTGAAACCATGCAAGGCGTTAAGCACTTGACTAACGAAGAAGCCGCAGAAATCAGAAAGCATGATCCCGAT TCCAATCAAAGGGATTTATTCAATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTAAGCATTCAAGTGATGCCAGA AGAGGATGCTAAGAAGTATCGATTCCATCCGTTTGATGTCACTAAAATTTGGTATCTCCAAGATTATCCATTGATGGAAG TGGGCATCGTAGAGTTGAATAAAAATCCTGAAAACTACTTCGCAGAAGTGGAGCAAGCGGCATTCAGTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTACAAGGGCGTTTGTTCTCTTATGGAGACACACACCGCTACCGCTT AGGGGTTAATTATCCTCAAATACCGGTTAATAAACCAAGATGCCCGTTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGATACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAAGATAAGAGTGCGAGAGATCCT AAGTTCAACTTAGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGATGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGAGAGTCTTTGGCTC ATGTTACCCATAAGGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGGAAAAGACATGCACCACACAAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNH DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEIRKHDPD SNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHGKDMHHTKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 2e-135 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 1e-92 | 52 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 3e-90 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 3e-90 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 3e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 3e-90 | 47 |
