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Name : hom (HPP12_0829) Accession : YP_002301461.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : - Position : 881571 - 882836 bp Length : 1266 bp Strand : + Note : catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine DNA sequence : ATGAAAAAGAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATCAAAGACAGGGCCGGCGTGGAAATTGGGATTAAAAAAGCGGTGGTGCGAGATGTGAAAAAGCACAAGGGCT ATGCTTTTGAAATCAGTAATGATTTAGAAAGCCTGATAGAAGATGAAGAAATTGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTAGC GTACCACCGCTATGAATTAGAACAAACCGCTAAAAACACCCCTATAGGCTTTGAAGCGAGCGTGTGCGGGGGTATCCCCA TCATTAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCCTTGAAAGACGCGCAGCATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAAGGCATTGATGCGGCGCACAAATTATTGATTTTAGCGTCTTTAGCGTATGGCATTGACG CGAAATTAGAAGAAATTTTGATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAGTTTGCTAAAGAATTTGGTTAT AGCATCAAACTTTTAGGCATCGCTAAAAAACACCCAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAACGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCCATAAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGCTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCTAAAAATGATATTTCGCTCAACAATGTCTTGC AAAAAGAAATCCCGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAGTCTATGTTAAACGCC CTTAAAGAGCTTGAAAATCTAAAAAGCGTGTTGGATACCCCTAAAATGATTCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIGIKKAVVRDVKKHKGYAFEISNDLESLIEDEEIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQTAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHPDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAKNDISLNNVLQKEIPHSNKAKILFSTHTTNEKSMLNA LKELENLKSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 3e-62 | 42 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 3e-62 | 42 |
