|
Name : HPP12_0556 (HPP12_0556) Accession : YP_002301190.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : glutamate racemase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0796 EC number : - Position : 589771 - 590538 bp Length : 768 bp Strand : - Note : converts L-glutamate to D-glutamate, a component of peptidoglycan DNA sequence : ATGAAAATAGGCGTTTTTGATAGCGGTGTGGGAGGGTTTAGCGTTTTAAAAAGCCTTTTAAAAGCGCAACTATTTGATGA AATCATCTACTATGGCGATAGCGCTAGAGTGCCTTATGGCACTAAAGACCCCACCACGATCAAGCAATTTGGCTTAGAGG CTTTGGATTTTTTCAAACCGCACCAGATTAAATTATTGATTGTGGCATGCAACACAGCGAGCGCTCTGGCTTTAGAAGAG ATGCAAAAGCATTCCAAAATCCCTATTGTGGGCGTGATTGAGCCAAGCATTTTAGCGATCAAGCAACAAGTAAAAGATAA AAACGCCCCTATTTTAGTGCTAGGGACAAAAGCGACGATTCAATCCAACGCTTATGACAACGCCCTGAAACAACAAGGCT ATTTGAATGTTTCGCATTTAGCCACTTCTCTTTTTGTGCCTTTGATTGAAGAAAATATTTTAGAGGGCGAATTGTTAGAA ACTTGCATGCGTTATTATTTCACTCCCTTAAAGATTTTACCTGAAGTGATTATTTTAGGTTGCACGCATTTTCCCTTAAT CGCTCAAAAAATTGAGGGCTATTTTATGGGGCATTTTGCCCTTCCAACGCCCCCCCTACTCATCCATTCTGGCGACGCTA TTGTGGGATATTTGCAGCAAAAATACGCCCTTAAAAAAAATGCACACGCATTCCCTAAAGTGGAATTTCATGCGAGCGGC GATGTGGTTTGGCTAGAAAAACAGGCTAAAGAATGGCTCAAATTGTAA Protein sequence : MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHQIKLLIVACNTASALALEE MQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEENILEGELLE TCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVGYLQQKYALKKNAHAFPKVEFHASG DVVWLEKQAKEWLKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glr | AAR03971.1 | glutamate racemase | Not tested | cag PAI | Protein | 4e-101 | 98 |
| glr | AAR03940.1 | glutamate racemase | Not tested | cag PAI | Protein | 9e-102 | 98 |
| glr | AAC44708.1 | Glr | Not tested | cag PAI | Protein | 3e-102 | 98 |
| glr | AAR03910.1 | glutamate racemase | Not tested | cag PAI | Protein | 2e-98 | 97 |
| HP0549 | BAD13991.1 | - | Not tested | cag PAI | Protein | 1e-99 | 96 |
| HP0549 | NP_207344.1 | glutamate racemase | Not tested | cag PAI | Protein | 6e-100 | 96 |
| glr | AAR03882.1 | glutamate racemase | Not tested | cag PAI | Protein | 8e-99 | 95 |
| HP0549 | BAD13881.1 | - | Not tested | cag PAI | Protein | 6e-95 | 95 |
| murI | NP_223214.1 | glutamate racemase | Not tested | cag PAI | Protein | 9e-98 | 94 |
