Gene Information

Name : cagI (HPP12_0547)
Accession : YP_002301181.1
Strain : Helicobacter pylori P12
Genome accession: NC_011498
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 577265 - 578410 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence :
ATGAAATGTTTTTTAAGCATATTTTCTTTCTTAACTTTTTGTGGTTTGTCTCTGAATGGTGCAGAAGTAGTAATAACGCT
TGAACCCGCCTTAAAAGCCATTCAGGCGGACGCACAAGCCAAACAAAAAACCGCTCAAGCCGAATTAAAAGCTATAGAAG
CTCAATCTAATGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGAGAATTGAGAACCCAGCTTGCAACTATGAGCGCT
ATGTTAAAAGGGGCTAATGGCGTTATTAATGGTGTCAATGGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCT
TGGCGTCATGGAAGGGTATTCAAGCGCGCTTAGTGCATTGGGGGGGAATGTCAAAATGATCGTGGAAAAACAAAAAATTA
ATACCCAAACAGAAATCCAAAACATGCAAATCGCACTCCAAAAAAATAACGAAATAATCAAGCTCAAAATGAACCAGCAA
AACGCTCTCTTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACTCTAAAAACACAAATGGAAATGCTTTCTCAAGC
TCTAGGAAGTTCTTCTGACAACGCTCAATACATCGCTTACAATACGATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAG
GTTTTGAAACATGGTTGAAAACAGCTATGCAAAAAGCGACCCTTATTGATTATAATTCCCTAACAGGTCAGGCTTTGTTT
CAAAGTGCCATCTACGCGCCTGCTCTTAGTTTTTTTTCAAGCATGGGCGCACCATTTGGAATCATTGAAACATTTACTCT
AGCACCCACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAA
TGATTGTAGCCCTTATTCAAAATAAACTGAGTGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGGAGAA
ATCAAAACCTTAAAAGGATCAGTAGATTTGAACGCACTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTA
TATAGAGAATCTTGAAAAAAAAGCCGACCTTTGGGAAGAACAACTGAAATTAGAAAGAGAAACGACAGCAAGAAACATTG
CTAGCTCTAAAGTTATTGTCAAATGA

Protein sequence :
MKCFLSIFSFLTFCGLSLNGAEVVITLEPALKAIQADAQAKQKTAQAELKAIEAQSNAKEKAIQAQIEGELRTQLATMSA
MLKGANGVINGVNGMTGGFFAGSDILLGVMEGYSSALSALGGNVKMIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQ
NALLEALKNSFEPSVTLKTQMEMLSQALGSSSDNAQYIAYNTIGIKAFEETLKGFETWLKTAMQKATLIDYNSLTGQALF
QSAIYAPALSFFSSMGAPFGIIETFTLAPTKCPYLDGLKISACLMEQVIQNYRMIVALIQNKLSDADFQNIAYLNGINGE
IKTLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIASSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagI AAF80208.1 CagI Virulence cag PAI Protein 3e-161 99
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 4e-161 99
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 1e-161 99
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 3e-160 99
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 2e-160 99
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 2e-160 99
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-160 99
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 3e-160 99
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-161 99
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-160 99
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 5e-161 99
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 9e-161 99
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-158 98
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-159 98
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-155 98
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-149 96
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-155 96
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-155 96
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-155 96
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-155 96
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-155 96
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-154 95
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-155 95
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-155 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cagI YP_002301181.1 cag pathogenicity island protein I VFG0299 Protein 2e-161 99