Gene Information

Name : cagP (HPP12_0543)
Accession : YP_002301177.1
Strain : Helicobacter pylori P12
Genome accession: NC_011498
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein P
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 573621 - 573974 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACGACCGATTAGCAAATTAAGCAAATTAAAACAAAACTTTTTACAATTCAAACATTCTTTCAACAAACATTTAGA
TAAATACAGCCTTTATTATAGGCTGTTCAATATCAGCTCTATCGTTATAGGTTTTTTAATAGCGCTTTTTTCTTATGGAG
CAGGGGTGATTTTAGTTTATCCAATATTATTCCTATTTGCTCTTATAATAAAACCTAGCTTTTTTTATTACACTACTTAT
CTTTTGCTACTCGTTTCTCTCAGCATAATAAGCAAATACTATCTCTTAAGCCACGCAAAATTCACAATGAAGCTAATCAT
ACTTATGACTCAATGGCAAAATTGGTTCTTATGA

Protein sequence : 
MKRPISKLSKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIALFSYGAGVILVYPILFLFALIIKPSFFYYTTY
LLLLVSLSIISKYYLLSHAKFTMKLIILMTQWQNWFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagP AAF80206.1 CagP Virulence cag PAI Protein 1e-29 98
HP0536 BAD13842.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-30 97
HP0536 BAD13924.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-31 96
cagP NP_223202.1 cag island protein Virulence cag PAI Protein 1e-30 96
HP0536 NP_207332.1 cag pathogenicity island protein (cag15) Virulence cag PAI Protein 8e-31 96
HP0536 BAD14034.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-30 95
HP0536 BAD13897.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-30 95
HP0536 BAD13952.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-30 95
HP0536 BAD14007.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-30 95
HP0536 BAD13869.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-30 95
cag15 AAR03870.1 Cag15 Virulence cag PAI Protein 2e-30 95
cag15 AAR03928.1 Cag15 Virulence cag PAI Protein 2e-30 95
HP0536 BAD13979.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-28 95
cag15 AAR03959.1 Cag15 Virulence cag PAI Protein 3e-30 94
HP0536 BAD14061.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-30 94
HP0536 BAD13815.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-30 94
HP0536 BAD13788.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-30 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cagP YP_002301177.1 cag pathogenicity island protein P VFG0295 Protein 2e-31 96