Gene Information

Name : cagR (HPP12_0542)
Accession : YP_002301176.1
Strain : Helicobacter pylori P12
Genome accession: NC_011498
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein R
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 572903 - 573205 bp
Length : 303 bp
Strand : +
Note : -

DNA sequence :
ATGTTTTTGATACTATTGAATCCATTCTTCAGCACTTCTGCCATAAAATTCTTGATATTATCCATAGGCAAGTTGAATTT
TTTCCCTAATGCTTCATTAAGTCCCATCATTAACATCAGGAAGAACAAAAAATTTAATATCATAGAAAACAAATCACTGG
ATAAACCTGTAAAAAGATTTGTTCCGCCACCCAACAAAGAAGCTAAAATTTTTCCCATGATCAGTCCTTTTATTTTTGGT
TGTGTAAGTTCTTGCTTGTTCGGATCTCTAATGCGTGTTTTAGTAGGAAGCATTTCACAATAG

Protein sequence :
MFLILLNPFFSTSAIKFLILSIGKLNFFPNASLSPIINIRKNKKFNIIENKSLDKPVKRFVPPPNKEAKIFPMISPFIFG
CVSSCLFGSLMRVLVGSISQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagR AAC44692.1 CagR Virulence cag PAI Protein 9e-31 99
HPB8_708 YP_003728729.1 hypothetical protein Not tested cag PAI Protein 9e-30 96