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Name : cagY (HPP12_0534) Accession : YP_002301168.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Y VirB10-like protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2948 EC number : - Position : 559964 - 565669 bp Length : 5706 bp Strand : - Note : - DNA sequence : ATGAATGAAGAAAACGATAAACTTGAAACTTCTAAAAAAACCCAACAAGATTCACCCCAAGATCTATCTAATGAAGAAGC AACAGAAGTCAATCATTTTGAAGATCTTTTAAAAGAAGAAAGCTCAGATAATCATCTTGACAACCCCACAGAAATTAAAA CCAATTTTGATGGAGACAAGCTAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCTAGCAAT GGCAGTCTAGCAGACAAGTTGTTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACCTTTCACTCAGCAAAAGAATTT AGATGAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGAAAATAATGAGTATCAAGAAGAAACTCAAACGGGCTTAA TTGATGATGAAACTTCTAAAAAAACCCAACAAGATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAAGTCAATCGC TTTGAAGATTCTTTAAAAGAAGAAAGCTCAGATCAGCATCTTGACAATTCCGCAGAAACTCAAACCAATTTTGATAAAGA CAAGTCAGAAGAAATAACTAACGACTCTAACGATCAAGAGATTATCAAAGGAAGCAAAAAGAAATACATTATTAGTGGTC TTGTAGTCGCTGTTCTTATCGTGATTATCTTATTTTCTAGAAGCATTTTTCACTACTTCATGCCTTTGGAAGATAAAAGC TCTCGTTTTAGCAAAGACAGGAATCTTTATGTCAATGATGAAATCCAAATAAGGCAAGAGTATAACCGATTGCTGAAAGA ACGGAATGAAAAAGGCAATATGATCGATAAGAATCTTTTCTTCAATGACGATCCCAATAGAACCTTATACAACTATTTAA ATATTGCAGAAATTGAGGACAAAAACCCATTGAGAGCCTTTTATGAATGCATTAGTAATGGTGGCAACTATGAAGAATGT TTGAAGCTTATCAAAGACAAAAAACTTCAAGATCAGATGAAAAAGACTCTAGAGGCTTATAAAGACTGCATCAAAAATGC CAAAACTGAAGAAGAAAGGATCAAGTGTTTAGATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTACTGAACCAACAAA AAGTTCAAGTGGCGCTAGATTGTTTGAAAAAGGCTAAAACCGATGAAGAACGAAACGAGTGCCTAAAACTCATAAATGAC CCTGAGATTAGAGAGAAATTCCGTAAGGAATTAGGGCTTCAAAAAGAGCTTCAAGTGTATAAGGATTGTATCAAAAACGC CAAAACAGAAGCTGAGAAAAACGAATGCTTGAAAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAACAACAAGTGCTAG ATTGTTTGAAAAACGCTAAAACTGATGAAGAACGAAACGAGTGCTTGAAAAATATTCCCCAAGACTTGCAAAAAGAACTA CTAGCTGATATGAGTGTCAAGGCTTACAAGGACTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAA ATTGCTCACGCCTGAAGCGAAAAAAAAGTTAGAACAACAAGTGCTAGATTGTTTGAAAAACGCTAAAACTGATGAAGAAC GAAAAAAATGTTTGAAAGATCTCCCTAAAGACTTACAAAGCGATATTTTAGCCAAAGAGAGCGTTAAAGCTTATAAAGAC TGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAAAAAACTTTTAGA AGAAGAAGCCAAAGAGAGCGTTAAAGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCG AGAAATTGCTCACGCCTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTACTTAGATTGCGTATCT CAAGCCAAAAACGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAAAAAACTTTTAGAGCAACAAGC GCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCAGAAAA AGGTTTTAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAAACGAAGCTGAGAAAAAAGAATGC GAGAAATTACTCACCCCTGAAGCGAGGAAACTCTTAGAAGAGGCTAAAGAGAGTGTTAAAGCTTATAAAGACTGCGTATC AAAAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAAAAATTACTCACGCCTGAAGCGAAAAAACTTTTAGAAGAAGAAG CCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTG CTCACCCCTGAAGCGAGGAAACTTTTAGAAGAAGCTAAAGAGAGTCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAG AAATGAAGAAGAAAGGAGAGCTTGCGAGAAACTACTCACCCCTGAAGCGAGGAAACTCTTAGAACAACAAGCGCTAGATT GTTTGAAAAACGCTAAAACTGATGAAGAACGAAAAAAATGTTTGAAAGATCTCCCTAAAGACTTACAAAGCGATATTTTA GCCAAAGAGAGCGTTAAAGCTTATAAAGACTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATT GCTCACGCCTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAAAAAGCGTTAAAGCTTATTTGGATTGCGTATCTCAAGCCA AAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAAAAAGC GTTAAGGCTTACTTAGATTGCGTATCTCAAGCCAAAAACGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGA AGCGAAAAAACTTTTAGAGCAACAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCA AAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCC AAAAACGAAGCTGAGAAAAAAGAATGCGAAAAATTACTCACCCCTGAAGCGAGGAAACTCTTAGAAGAGGCTAAAGAGAG TCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAATTGCTCACCCCTG AAGCGAGGAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGACTGCGTATCAAGAGCTAGGAATGAA AAAGAGAAACAAGAATGCGAGAAATTGCTCACCCCTGAAGCAAGAAAATTTTTAGCGAAGCAAGTGCTAAATTGTTTGGA AAAAGCTGGAAATGAAGAAGAAAGAAAAGCATGTCTTAAAAATCTCCCTAAAGACTTACAGGAAAATGTTTTAGCTAAAG AGAGTCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAACTACTCACC CCTGAAGCGAGAAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTAGATTGCGTTTCAAGAGCTAGGAA TGAAAAAGAGAAACAAGAATGCGAGAAATTACTCACGCCTGAAGCGAGAAAATTCTTAGCGAAGCAAGTGCTAAATTGTT TGGAAAAAGCTGGAAATGAAGAAGAAAGAAAAGCATGTCTTAAAAATCTCCCTAAAGACTTACAGGAAAATGTTTTAGCT AAAGAGAGTCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAACTACT CACCCCTGAAGCGAGAAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTAGATTGCGTTTCAAGAGCTA GGAATGAAAAAGAGAAACAAGAATGCGAGAAATTACTCACGCCTGAAGCGAGAAAATTCTTAGCGAAAGAACTCCAACAA AAAGATAAAGCGATCAAAGATTGCTTGAAAAATGCCGATCCTAACGACAGAGCGGCTATTATGAAGTGTTTGGATGGTTT GAGCGATGAAGAGAAGCTCAAATACCTGCAAGAAGCTAGAGAAAAGGCTGTTGCGGATTGTTTGGCTATGGCTAAAACCG ATGAAGAAAAAAGGAAATGCCAAAACCTTTATAGCGATTTGATCCAAGAAATCCAAAATAAAAGGACACAAAGCAAACAA AATCAATTGAGCAAAACAGAAAGATTGCATCAAGCAAGCGAGTGCTTGGATAACTTAGATGACCCTACCGATCAACAAGC CATAGAGCAATGTTTAGAGGGCTTGAGCGATAGTGAAAGGGCACTAATTCTAGGAATCAAACGACAAGCTGATGAAGTGG ATCTGATTTATAGCGAACTAAGAAACCGCAAAACCTTTGATAACATGGCGGCTAAAGGTTATCCATTGTTACCAATGGAT TTCAAAAATGGTGGCGATATTGCCACTATTAACGCCACTAATGTTGATGCGGACAAAATAGCTAGCGATAATCCTATTTA TGCTTCCATAGAGCCTGATATTACCAAGCAATACGAAACAGAAAAAACCATTAAGGATAAGAATTTAGAAGCTAAATTGG CTAAGGCTTTAGGTGGTAATAAAAAAGATGACGATAAAGAAAAAAGTGAAAAATCCACAGCAAAAGCTAAAGCAGAAAGC AATAAGATAGACAAAGATGTCGCAGAAACTGCCAAGAATATCAGTGAAATCGCTCTTAAGAACAAAAAAGAAAAGAGTGG GGATTTTGTAGATGAAAATGGTAATCCCATTGATGACAAAAAGAAAGAAGAAAAACAAGATGAAACAAGCCCTGTCAAAC AGGCCTTTATAGGCAAGAGTGATCCCACATTTGTTTTAGCGCAATACACCCCCATTGAAATCACTCTGACTTCTAAAGTA GATGCCACTCTCACGGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTATGGAACATGAACGGTACTATGATCTTATTAGA CAAAGGCACTAAGGTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACGCCTATTATGACACGCTTAATGATAGTCTTCA CTAAAGCCATTACGCCTGATGGTGTGATTATACCTCTAGCAAACGCTCAAGCAGCAGGCATGCTGGGTGAAGCAGGGGTA GATGGCTATGTGAATAATCACTTTATGAAGCGCATAGGCTTTGCTGTGATAGCAAGCGTGGTTAATAGCTTCTTGCAAAC TGCGCCTATCATAGCTCTAGATAAACTCATAGGCCTTGGCAAAGGTAGAAGTGAAAGGACACCTGAATTTAATTACGCTT TGGGTCAAGCTATCAATGGCAGCATGCAAAGTTCAGCTCAGATGTCTAATCAAATTCTAGGGCAACTGATGAATATCCCC CCAAGTTTTTACAAAAATGAGGGCGATAGTATTAAGATTCTCACAATGGACGATATTGATTTTAGCGGTGTGTATGATGT TAAAATTACTAACAAATCTGTGGTAGATGAAATTATCAAACAAAGCACCAAAACTTTGTCTAGAGAACATGAAGAAATCA CCACAAGCCCCAAAGGTGGCAATTAA Protein sequence : MNEENDKLETSKKTQQDSPQDLSNEEATEVNHFEDLLKEESSDNHLDNPTEIKTNFDGDKLEETQTQMDSGGDETSESSN GSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNEYQEETQTGLIDDETSKKTQQDSPQDLSNEEATEVNR FEDSLKEESSDQHLDNSAETQTNFDKDKSEEITNDSNDQEIIKGSKKKYIISGLVVAVLIVIILFSRSIFHYFMPLEDKS SRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGNYEEC LKLIKDKKLQDQMKKTLEAYKDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKKAKTDEERNECLKLIND PEIREKFRKELGLQKELQVYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQVLDCLKNAKTDEERNECLKNIPQDLQKEL LADMSVKAYKDCVSKARNEKEKKECEKLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD CVSQAKTEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVS QAKNEAEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKNEAEKKEC EKLLTPEARKLLEEAKESVKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKL LTPEARKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQQALDCLKNAKTDEERKKCLKDLPKDLQSDIL AKESVKAYKDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKKS VKAYLDCVSQAKNEAEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQA KNEAEKKECEKLLTPEARKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNE KEKQECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLT PEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLA KESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQ KDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVADCLAMAKTDEEKRKCQNLYSDLIQEIQNKRTQSKQ NQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDLIYSELRNRKTFDNMAAKGYPLLPMD FKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKNLEAKLAKALGGNKKDDDKEKSEKSTAKAKAES NKIDKDVAETAKNISEIALKNKKEKSGDFVDENGNPIDDKKKEEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKV DATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGV DGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIP PSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0527 | BAD13833.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| HP0527 | BAD13998.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| HP0527 | BAD13888.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| HP0527 | BAD14052.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| cagY | YP_005774542.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| HP0527 | BAD13970.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| HP0527 | BAD14026.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| HP0527 | BAD13779.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| cagY | YP_005779063.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| HP0527 | NP_207323.1 | cag pathogenicity island protein (cag7) | Virulence | cag PAI | Protein | 0.0 | 83 |
| cagY | YP_005777271.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 82 |
| cag-Y | AAF80198.1 | Cag-Y | Virulence | cag PAI | Protein | 0.0 | 81 |
| HP0527 | BAD13806.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 80 |
| cagY | YP_003728737.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 79 |
| orf13/14 | NP_223194.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 77 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cagY | YP_002301168.1 | cag pathogenicity island protein Y VirB10-like protein | VFG0287 | Protein | 0.0 | 83 |
