Gene Information

Name : cag2 (HPP12_0528)
Accession : YP_002301162.1
Strain : Helicobacter pylori P12
Genome accession: NC_011498
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein Epsilon
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 553160 - 553525 bp
Length : 366 bp
Strand : +
Note : cagEpsilon

DNA sequence :
ATGATACAAAGAGGATTGAGTAGTGTCTCATTTTATTATGGTTGCTCTAATTATGTAAATAAAGGCGACTGTAAGGGCGT
TTTACGAGAAATAAATGGCTCAATGAAAATGGTTTGCTTGGCTAGTGTAAAAGCTAATATTAAAGAAAATTCTTTTTTCT
TAGGGTGTAAAAATTATCTTAAGTGTAAACTTAAGTGCAAATGGACTGCTAGCGTGGATTCACAAGATCCTAAATATCCC
AAATGCAATGGATTGATGAAAAGAAAAAAGAATTTCAAAAACAATGGGTTTTTTACAGCTGTATCACTTATCTTAAATGC
AAGGGAATTTTGTCTCTATATCAATTCTGAAAAAAAAGGAAACTAA

Protein sequence :
MIQRGLSSVSFYYGCSNYVNKGDCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYLKCKLKCKWTASVDSQDPKYP
KCNGLMKRKKNFKNNGFFTAVSLILNAREFCLYINSEKKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hp0521 AAR07060.1 cag 2 Virulence cag PAI Protein 2e-32 94
hp0521 AAR07059.1 cag 2 Virulence cag PAI Protein 3e-32 93
hp0521 AAR07056.1 cag 2 Virulence cag PAI Protein 2e-32 93
hp0521 AAR07057.1 cag 2 Virulence cag PAI Protein 2e-32 93
hp0521 AAR07058.1 cag 2 Virulence cag PAI Protein 2e-32 92
hp0521 AAR07067.1 cag 2 Virulence cag PAI Protein 9e-32 91
hp0521 AAR07063.1 cag 2 Virulence cag PAI Protein 2e-32 88
hp0521 AAR07064.1 cag 2 Virulence cag PAI Protein 4e-25 87
hp0521 AAR07065.1 cag 2 Virulence cag PAI Protein 1e-25 84
hp0521 AAR07062.1 cag 2 Virulence cag PAI Protein 2e-26 80
cag-epsilon AAF80192.1 Cag-epsilon Virulence cag PAI Protein 2e-24 79
hp0521 AAR07061.1 cag 2 Virulence cag PAI Protein 2e-24 79
hp0521 AAR07066.1 cag 2 Virulence cag PAI Protein 2e-25 77