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Name : hslU (HPP12_0522) Accession : YP_002301156.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 548206 - 549537 bp Length : 1332 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTAAATTGAATATGACCCCACGAGAAATTGTCGCTTATTTAGATGAATACATCATTGGGCAAAAGGAAGCTAAAAA GTCTATCGCTATCGCTTTTAGGAATCGTTACAGGCGTTTGCAACTGGAAAAATCCTTACAAGAAGAAATTACGCCTAAAA ACATTTTAATGATTGGCTCTACTGGTGTGGGTAAAACGGAAATCGCAAGAAGAATAGCAAAAATCATGGAACTCCCCTTT GTGAAAGTGGAAGCGAGCAAATACACGGAAGTGGGTTTTGTGGGGCGTGATGTGGAGTCTATGGTGAGGGATTTAGTCAA TAACAGCGTGCTTTTAGTGGAAAATGAGCATAAAGAAAAATTAAAAGACAAGATTGAAGAAGCGGTTATAGAAAAAATCG CTAAAAAACTCCTACCCCCCTTGCCTAGTGGCGTGAGCGAAGAAAAAAAACAAGAATATGCTAACAGCCTTTTAAAAATG CAACAAAGAATCGCGCAAGGCGAGTTGGATAGTAGAGAAATTGAAATTGAAGTGCGTAAAAAAAGCATAGAGATTGATTC TAATGTGCCGCCTGAAATTTTAAGGGTTCAAGAAAACTTGATTAAGGTTTTCCATAAAGAACAGGATAAAGTCAAAAAAA CTTTAAGCGTTAAAGAGGCTAAAGAAGCCCTAAAAGCAGAAATCAGCGACACGCTTTTAGACAGCGAAGCCATTAAAATG GAGGGTTTGAAGCGCGCGGAAAGTTCAGGGGTGATTTTTATTGATGAAATTGATAAGATCGCTGTCAGCTCTAAAGAAGG AAGCCGTCAAGATCCTAGTAAAGAGGGGGTTCAAAGGGATTTGTTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGT ATGGCTCTATTAAAACAGAGCATATTTTATTCATTGCAGCAGGGGCTTTTCATCTCTCTAAGCCAAGCGATCTCATTCCT GAATTGCAGGGGCGTTTCCCCTTAAGGGTGGAGTTAGAGAATTTAACCGAAGAAATCATGTATATGATTTTAACCCAAAC TAAAACCTCTATCATTAAACAATACCAAGCCCTTTTAAAGGTGGAAGGCGTAGGAATTGCGTTTGAAGACGATGCGATCA AAGAGTTAGCCAAACTTTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGCGCTAGAAGGTTGCACACCACCATTGAA AAAGTGCTAGAAGACATTAGTTTTGAAGCGGAGGATTATTCTGGGCAAAAGGTTACTATCACTAAAGAGTTGGTTCAATC CAAGCTAGAGGATTTAGTGGCTGATGAAAATTTAGTGAAGTATATTTTATAA Protein sequence : MSKLNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIMELPF VKVEASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVIEKIAKKLLPPLPSGVSEEKKQEYANSLLKM QQRIAQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENLIKVFHKEQDKVKKTLSVKEAKEALKAEISDTLLDSEAIKM EGLKRAESSGVIFIDEIDKIAVSSKEGSRQDPSKEGVQRDLLPIVEGSVVNTKYGSIKTEHILFIAAGAFHLSKPSDLIP ELQGRFPLRVELENLTEEIMYMILTQTKTSIIKQYQALLKVEGVGIAFEDDAIKELAKLSYNANQKSEDIGARRLHTTIE KVLEDISFEAEDYSGQKVTITKELVQSKLEDLVADENLVKYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 0.0 | 99 |
