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Name : virD2-1 (HPP12_0451) Accession : YP_002301087.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Virulence Product : relaxase Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3843 EC number : - Position : 473042 - 474955 bp Length : 1914 bp Strand : - Note : - DNA sequence : ATGGCGTTAGAAAAAAGTTATAGTAAAGACTTTGAAAGCGATGAGCTTTTTGATTATGAAATCATCAAGCCCAAAAAGAC GCTTAAGATACAATACACTTATGCTAAACGCTACTATAAAGAAGTAGAAAAGTTTGCTAAAAATTTAACCCAACTGACAC AAGAAGAATTCATGCGTTTAAGAGAGCCACAAAAACAAGTGGTCATCAAAAACATAGGCAACATGACACGCTTGCATTCA AAAAGAGCGATGGATTATACCGCTAAACATGGTGAGCTAGTGAGAGATGAATTTTTTAATGAAGTTAATTATAATGATAT AGCAGAGCAATGGAATGAGCAATTTGAAAGAATATTAGAAAAGAATAGCCGTGTTAAAAATTGCGCTTTACATCTGGTAT TTAGCATTGATGAAAATTGTAATGAAAAAAATTTAAAAGCTTTGGAATTAAGCGTGTATCAAACACTCACTAACACGCTA GGTTATGATTATCCTTTTATAATGAAACTCCATGCACACCAAAACAATCCGCATGCGCATGTGATTATCAACAAGACCAA CAAAATTACCAATAAGCAACTACGCTTTCATTCTAAAGACAGCTGTAAAGAGTTTTACCACACACTAAGAGAAACATTTA AAGATTATTTATTTGCTAACTCAAAAGGCGAATTGCAATATTCTAACACGCCTAATATTTATAGGGCGATTAAAAACATA GAAACAGAGTTAGATGCACTAGAAAAACAGGCTAGAAATAATAAGAGTTTTAGGCATGAAAACTATTTTTATAAAGTTTT GGGCAGTGCGACTTCTCAAATAGAAAGCTTGAAAAAAAGAGAAAATGCCCTATCTGATCATTTAGATAATCTAAAAAGTT TATTAGAAAAAACACATTGGGAAAAAGAAAATTTCACGCCCCCTACAAATGAAAAAGAACTTAATAGGCAACTTAAAGAA ATAAAATGGTTAAATAAAGAGTCTTTAACCCCTAAAAAAACTTATAAAAAAACTCAAAAATTGGTTGTCTGTAAAAGCCC TTTAATAAAAGATTGTCTTTATACCACCAAAAAACTTTTTGCCACACAAAAAAAGATTATAGATTTAGAAAAAGATTATA AAGATTTAAAAGTCTTAAAGGAAGAATTTAGCAAAGATTTAGAAGTTAATTTATCCCATTCAAAAAAACGCTTTGAGCTT TACACTAGACTAAAGAGCATGAGCAAAGTTTTTATAAGCAAAAGCATTGTTAAAAATTTAGAAAAAATTGCTTTAGATTT TAAAAGCGATAGGCATAGTATTCCACAAAGAGCTTTTGAATTTTTTAGGTATATGAATTATCAAAATTTAAGCTTGACTA ATAAAAGTAATATGTTTTTAGTGGCTAAGTTTTTTAAAGATAGCGCTTTACTTGTTAATATTGCTAGGTTTGAAATGAAA AAGATAGATGATAGTGTTAAAAATTCTAGCCCACAAGGCAATTTATTAGACAAACAAGTTTGGCTCAATCTTTTAGAACA TTTAAAAAGACTTGAAGAGGAAAATTATTGTTTTGCTAAGAAACGAAAAGAATTCTTAGAAACTAGAGCGATGGAGCTAT CAAAAGATTTGAAATTTTTAACGCAAGCTAATGAAAATGATTTACCCATTTATGAAAGAGGGCAAAGGGATAAAATCATT AAACGCTGTGAAAAATCGCTTAATTTTTTACAGAAAGAATTACAATGCTTTAAAACCTTATCAAAAAGTGCAAGTATAGC TTTAGAAAACTTGCAAAATAACCATCAAATCACAGCCGTTACACAAGACAAACAAGAAAACACAAACGCGCTCAAAAAAA TACCACTCAAAGATTTTAACAAAACCACTAATGAACCCATAAACCCTAACAATAACTATGAAATGGATTTTTAA Protein sequence : MALEKSYSKDFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQVVIKNIGNMTRLHS KRAMDYTAKHGELVRDEFFNEVNYNDIAEQWNEQFERILEKNSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTL GYDYPFIMKLHAHQNNPHAHVIINKTNKITNKQLRFHSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYRAIKNI ETELDALEKQARNNKSFRHENYFYKVLGSATSQIESLKKRENALSDHLDNLKSLLEKTHWEKENFTPPTNEKELNRQLKE IKWLNKESLTPKKTYKKTQKLVVCKSPLIKDCLYTTKKLFATQKKIIDLEKDYKDLKVLKEEFSKDLEVNLSHSKKRFEL YTRLKSMSKVFISKSIVKNLEKIALDFKSDRHSIPQRAFEFFRYMNYQNLSLTNKSNMFLVAKFFKDSALLVNIARFEMK KIDDSVKNSSPQGNLLDKQVWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANENDLPIYERGQRDKII KRCEKSLNFLQKELQCFKTLSKSASIALENLQNNHQITAVTQDKQENTNALKKIPLKDFNKTTNEPINPNNNYEMDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virD2-1 | YP_002301087.1 | relaxase | Virulence | cag PAI | Protein | 0.0 | 100 |
