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Name : tktA (HPP12_0356) Accession : YP_002300993.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 371517 - 373442 bp Length : 1926 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGCGATTGAGTAACGCTGACTTGGAACGATTAAAAAGCATGGCCAATACGCTTCGCTTTTTGTGCGCGGACATGATAGA TAAGGCTAATAGCGGGCATCCGGGCGTGTGCTTGGGATTAGCCGATGTGATGGTGGTTTTAAGCTTACATCTAAACCTAA ACCCCACTAACCCTAAATGGCTCAATAGGGACAGGCTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGTTTAGAAGATTTAAAGCGTTTCAGGCAATTACACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAGATCACGACAGGCCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGTCAATACGCTCAAAACCTTTTAGATAAACAAGCCATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGTGCTTCTTTAGCCGGGCACCTCAACCTAAACAATCTCATTGTGATTTATGACAG CAACCAGATCAGCATTGAAGGCGCTATCAATATTAGTTTTAGCGAACAGGTTAAGATGCGGTTTGTGGCACAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCGATTCATAACGCTTTAGAAGAAGCCAAAAAATCCCATAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGAGCTGTTGGCTTAGAAGGGAGTGAAAAAACGCATGGCTCGCCTTTAAA TAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAACCCTGATGAAAGCTTTATGATTAGTCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGCTTAGAGGCCTTATGGGAAAAATCCTTAAGCCCTAAAATAAAAGAA AAAATCCATGCGTTAAAGGATTTTGATTTTAACGCCATCCATTACCCCACCTTTAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGGGCTTTTTAGGGGGGAGCGCGGATTTAGCCCCAT CCAATAACACGCAATTAAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTGGTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTATTT AATGCCCAGCATGCGTTTGAGCGCTTTAATGAAACTGAAAGCCCTTTTTATCTTTACGCATGACAGCATTGGCGTGGGTG AAGATGGGGCGACGCACCAGCCCATAGAGCAATTGAGCCATTTACGCGCTTTGCCCAATTTCTATGCTTTCAGGCCAAGT GATGCTTTTGAAAATACGGCTTGCATGCAAGTAGCGTTAAGTTTGAACGCTCCTAGCGCTTTTATTTTATCGCGCCAGAA TTTATCCGTGCTTGATGAGGTTTCTAAAGATCAGGTTTTAAAAGGGGCGTATGTTAAATATGATGCTAAAAACCCCGCTA TCACGCTGGTTGCGAGCGGGAGCGAAGTTTCTTTGGCTTTAGAAAGCGCTAAAATTTTAGAGCGAGAAAATATCCCCACT CAAGTGGTGAGCGCGCCATGCTTTGATTTATTGATAGAGCAAGAAGAAAGCTATCTTAAAGAACTCTTTAAAGGTAAAGT TTTAGTCATTGAAGCGAGCCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGTT CGGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTCAGCGTTGAAAACATCACCGCTCAAGCTAAAAGGTTACTCAAC GCATGA Protein sequence : MRLSNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKRFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKQAISHKVYCLCGDGD LQEGISYESASLAGHLNLNNLIVIYDSNQISIEGAINISFSEQVKMRFVAQNWEVLECDGHDYQAIHNALEEAKKSHKPT LLIAHTIIGKGAVGLEGSEKTHGSPLNKEVLKQSKENAQINPDESFMISPKNKMHFEEVKVRGVSLEALWEKSLSPKIKE KIHALKDFDFNAIHYPTFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTQLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLLVPFCATFFVFSDYLMPSMRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQVALSLNAPSAFILSRQNLSVLDEVSKDQVLKGAYVKYDAKNPAITLVASGSEVSLALESAKILERENIPT QVVSAPCFDLLIEQEESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITAQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-95 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-86 | 41 |
