Gene Information

Name : hemC (HPP12_0237)
Accession : YP_002300876.1
Strain : Helicobacter pylori P12
Genome accession: NC_011498
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 243680 - 244600 bp
Length : 921 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
GTGGGAAATTTAGTGATTGGCTCTAGGGGGAGCGAACTAGCCTTATGGCAAGCGAATCACATTAAAGAACGCCTGAAAAA
AGAATGCTTGATAGAAAGCGAAATTCAAATCGTTAAGACTAAGGGCGATAAAATCTTAGACACCCCCCTAAATAAGATTG
GCGGTAAGGGGCTATTCACTAAGGAATTAGAAGAATTGCTTTTAAAAGGCACAATTGATTTGGCGGTGCATTCTTTAAAG
GATGTGCCGGTCGTGTTTGAAAAGGGGTTAGACTTGGCATGCATCACTAAAAGGGCTGATGTGAGGGACACTTTTTTAAG
CGTGAAGTTCCCTGATTTGATGAGCTTGCCTAAAGGAGCCAAGGTTGGCACGACTTCTTTAAGGCGCTCTATGCAACTCA
AACTGAAGCGCCAGGATCTAGACACAGAAAGCTTAAGGGGGAATGTCCAAACCCGTTTAAAAAAGCTTGAATGCGGAGAA
TTTGACGCTATCATTTTAGCTGAAGCCGGGTTATGCCGTCTAGAAATTCAAGGAGCGAAATACCGCAAGGCTTTTAGCGT
AAAAGAAATGATTCCTAGCATGGGTCAGGGGGCTTTAGGAGTAGAAATGCTCAAAAACCACAAGCATTTTGCCACGCTCC
AAAAACTCAATGACGAGAAAAGCGCGTTTTGCTGCCGTTTAGAAAGGGAGTTTATCAAGGGGCTTAATGGGGGGTGTCAG
ATCCCTATAGGCGTGCATGCGAGTTTAATGGGCGATAGGGTTAAAATCCAGGCAGTTTTAGGCTTGCCTAACGGGAAAGA
AGTCATCACTAAAGAAAAGCGAGGGGATAAAACTAAAGCGTTTGATTTAGTTCAAGAGCTTTTAGAAGAATTTTTGCAAA
GTGGGGCCAAAGAGATTTTAGAAAAGGCGCAGTTGTTTTAA

Protein sequence : 
MGNLVIGSRGSELALWQANHIKERLKKECLIESEIQIVKTKGDKILDTPLNKIGGKGLFTKELEELLLKGTIDLAVHSLK
DVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGE
FDAIILAEAGLCRLEIQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFATLQKLNDEKSAFCCRLEREFIKGLNGGCQ
IPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQELLEEFLQSGAKEILEKAQLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-44 46
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-44 46