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Name : HPP12_1555 (HPP12_1555) Accession : YP_002302181.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : outer membrane lipoprotein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1652751 - 1653566 bp Length : 816 bp Strand : + Note : - DNA sequence : ATGAATGCATTCAAGCGTATTATTAGTGTGGGGGTAATTGCTTTAGGTTTGTTTAACCTTTTAGACGCCAAACACCACAA AGAAAAAAAAGAAAACCACAAAATCACTCGTGAGCTTAAAGTGGGCGCTAACCCTGTGCCGCATGCGCAAATCTTGCAAT CAGTCGTGGACGATTTGAAGGAGAAAGGGATCAAATTAGTGATCGTGTCTTTTACGGATTATGTGTTGCCCAATTTGGCG CTCAATGACGGCTCTTTAGACGCGAATTACTTCCAGCACCGCCCTTATTTGGACAGGTTTAATTTGGACAGAAAAATGCA CCTTGTTGGTTTGGCCAATATCCATGTGGAGCCTTTAAGATTTTATTCTCAAAAAATCACAGACATTAAAAACCTTAAAA AAGGCTCAGTGATTGCTGTATCAAACGATCCGAGCAATCAAGGCAGGGCGTTGATTTTACTCCATAAACAAGGCCTTATC GCTCTCAAAGATCCAAGTAATCTATACGCTACGGAGTTTGATATTGTCAAAAACCCTTACAACATCAAAATCAAGCCTTT AGAAGCCGCATTATTGCCTAAAGTTTTAGGGGATGTGGATGGGGCTATTGTAACAGGGAATTATGCCTTGCAAGCAAAAC TCACCGGAGCCTTATTTTCAGAAGACAAGGACTCGCCTTATGCCAATCTAATAGCCGCTCGTGAGGATAACGCGCAAGAT GAAGCCATAAAGGCGCTAATTGAAGCTTTGCAGAGTGAAAAGACCAGGAAATTTATTTTGGATACCTATAAAGGGGCGAT TATCCCGGCTTTTTAA Protein sequence : MNAFKRIISVGVIALGLFNLLDAKHHKEKKENHKITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA LNDGSLDANYFQHRPYLDRFNLDRKMHLVGLANIHVEPLRFYSQKITDIKNLKKGSVIAVSNDPSNQGRALILLHKQGLI ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD EAIKALIEALQSEKTRKFILDTYKGAIIPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 4e-35 | 41 |
