|
Name : nupC (HPP12_1145) Accession : YP_002301777.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : pyrimidine nucleoside transport protein Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG1972 EC number : - Position : 1223882 - 1225138 bp Length : 1257 bp Strand : - Note : - DNA sequence : ATGATTTTTAGCTCTCTTTTTAGTGTTGTAGGGATGGCGGTGCTTTTTCTTATTGCTTGGGTGTTTTCTAGCAATAAAAG GGCTATAAATTATCGCACGATTGTCAGCGCCTTTGTGATTCAAGTGGCTTTGGGGGCGTTGGCTTTATATGTGCCTTTGG GTAGGGAAATGCTGCAAGGTTTAGCTAGCGGCATACAAAGCGTGATTTCTTACGGCTATGAGGGGGTGCGTTTTTTATTT GGCAATCTCGCTCCAAACGCTAAAGGCGATCAAGGGATAGGAGGCTTTATCTTTGCGATCAATGTTTTAGCGATCATTAT CTTTTTTGCTAGCTTGATTTCACTTCTATATTATTTAAAAATCATGCCTTTGTTTATCAATCTCATTGGTGGGGCGTTGC AAAAATGCTTAGGCACTTCTAAAGCAGAAAGCATGAGCGCAGCGGCTAATATTTTTGTCGCGCACACAGAAGCGCCCTTA GTCATTAAACCTTATTTGAAAAGCATGAGCGATTCAGAGATCTTTGCGGTCATGTGCGTGGGCATGGCTAGCGTTGCGGG GCCTGTGTTAGCCGGGTATGCGAGCATGGGCATTCCTTTGCCTTATTTAATAGCCGCATCGTTTATGTCCGCTCCTGGGG GTTTGTTGTTCGCTAAAATCATTTACCCGCAAAACGAAACCATTTCTAGCCATGCAGATGTTTCTGCAGAAAAGCATGTC AATGCCATAGAAGCTATCGCTAATGGGGCAAGCACAGGGCTAAATTTAGCCTTGCATGTGGGAGAGATGCTTTTAGCCTT TGTGGGGATGCTCGCGCTCATTAACGGGCTTTTAGGGGTTGTAGGGGGGTTTTTAGGCATGGAGCATTTGTCTTTAGGGT TGATTTTAGGCACGCTCTTAAAACCCTTAGCCTTTATGTTAGGCATTCCTTGGAGTCAGGCTGGGATTGCCGGAGAAATC ATAGGCATTAAAATCGCGCTCAATGAATTTGTGGGCTATATGCAATTTTTGCCTTATTTGGGCGATAACCCTCCTTTAAT CTTGAGCGAGAAAACTAAAGCGATCATCACCTTTGCGTTGTGCGGATTTGCTAACTTAAGCTCAGTCGCTATGCTCATTG GGGGGCTTGGCAGTTTAGTGCCTAAAAAGAAGGATCTCATTATAAGGCTTGCTTTAAAAGCGGTGCTTGTAGGCACGCTT TCTAATTTCATGAGCGCGACTATCGCCGGGTTATTCATAGGACTAAACGCTCATTAA Protein sequence : MIFSSLFSVVGMAVLFLIAWVFSSNKRAINYRTIVSAFVIQVALGALALYVPLGREMLQGLASGIQSVISYGYEGVRFLF GNLAPNAKGDQGIGGFIFAINVLAIIIFFASLISLLYYLKIMPLFINLIGGALQKCLGTSKAESMSAAANIFVAHTEAPL VIKPYLKSMSDSEIFAVMCVGMASVAGPVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISSHADVSAEKHV NAIEAIANGASTGLNLALHVGEMLLAFVGMLALINGLLGVVGGFLGMEHLSLGLILGTLLKPLAFMLGIPWSQAGIAGEI IGIKIALNEFVGYMQFLPYLGDNPPLILSEKTKAIITFALCGFANLSSVAMLIGGLGSLVPKKKDLIIRLALKAVLVGTL SNFMSATIAGLFIGLNAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 2e-50 | 42 |
