Gene Information

Name : fliP (RC1_0886)
Accession : YP_002297129.1
Strain : Rhodospirillum centenum SW
Genome accession: NC_011420
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 931775 - 932542 bp
Length : 768 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGCGCATCCTGCCCCCGCCGAAGACGCTGCTCTGGCTGCTGCTGCCGGTCGCCCTGGGCGGCCTTCTCCTGCTGCTGAC
GGGACCCGCCGCGGCGCAGAACTTCCAGCTCGACCTGGGCGAGCAGAGCGGCACCGCGACCGGCCGGATCATCCAGCTCG
TCGCGCTGCTGACGGTGCTGTCGCTGGCGCCCAGCATCCTGATCATGATGACCTGCTTCGTGCGCATCGTGATCGTGCTG
TCGTTCCTGCGCTCGGCCATGGGCACGCAGCAGGTGCCGCCGAACCAAGTGCTGGTCAGTCTCGCCCTGTTCCTGACCTT
CTTCATCATGGCGCCGGTGATGCAGGAGTCCTACGCCAACGGCATCCGGCCCCTGATCAATGAGGACATCGACGAGCTGA
CGGCGTTCAACCGCGCGGTGGAGCCGTTCCACGGCTTCATGATGAAGCATGTGCGCGAGCGCGACCTGCAGCTCTTCCTC
GACATCGCCAAGACGGGGCCGGTGGCCGACCCCAAGGACGTGCCGCTCCAGGTGGTGATCCCGGCCTTCATGCTGTCGGA
GCTGAAGCGGGCCTTCGAGATCGGCTTCCTGGTCTTCGTGCCGTTCCTGGTCATCGACATGGTGGTGGCGTCGGTGCTGA
TGTCGATGGGCATGATGATGCTGCCCCCGACCCTGATCGCCCTGCCGTTCAAGGTGATCTTCTTCGTCCTGGTGGACGGC
TGGTATCTGATCGTCGGCAGTCTGGTGCAGAGCTTCGGCACGACCTGA

Protein sequence :
MRILPPPKTLLWLLLPVALGGLLLLLTGPAAAQNFQLDLGEQSGTATGRIIQLVALLTVLSLAPSILIMMTCFVRIVIVL
SFLRSAMGTQQVPPNQVLVSLALFLTFFIMAPVMQESYANGIRPLINEDIDELTAFNRAVEPFHGFMMKHVRERDLQLFL
DIAKTGPVADPKDVPLQVVIPAFMLSELKRAFEIGFLVFVPFLVIDMVVASVLMSMGMMMLPPTLIALPFKVIFFVLVDG
WYLIVGSLVQSFGTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-31 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 9e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_002297129.1 flagellar biosynthesis protein FliP VFG2494 Protein 4e-58 53
fliP YP_002297129.1 flagellar biosynthesis protein FliP VFG1259 Protein 4e-52 51
fliP YP_002297129.1 flagellar biosynthesis protein FliP VFG2338 Protein 7e-52 50
fliP YP_002297129.1 flagellar biosynthesis protein FliP VFG2016 Protein 2e-47 48
fliP YP_002297129.1 flagellar biosynthesis protein FliP VFG0394 Protein 3e-33 41