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Name : kdpB (RC1_0435) Accession : YP_002296687.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 463493 - 465673 bp Length : 2181 bp Strand : - Note : identified by match to protein family HMM PF01177 match to protein family HMM TIGR00035 DNA sequence : ATGACCGACCCTGTGAAACGAGCCGAAGCCGCGCACCGGCGCGTCTGGCGGCGCTACATGAAGGACAACAGCGCCCCCGT CCTCAACTCCACCCAGGCGACGCTCCTGGACGGACGGATCGCTCGGCAGGCGCTGGGAGAGGCCTTCCTCAAGCTGGACC CGCGCCGGCTGGTCCGCAATCCGGTGATGTTCGTCACCGCCGTCGTGGCCCTGCTCACCACCCTGATCTTCGTCCGCGAC CTCGTCACAGGGGGCAGCGCCCTCGCCTCCCGCGAGATTGCCTCCTGGCTGCTGCTGACCGGCGGAGATCCCTCCATCAC CGGCCAGATCGCGGCCTGGCTCTGGTTCACCGTGCTGTTCGCCAACTTCGCCGAAGCCGTGGCGGAAGGGCGCGGCAAGG CGCAGGCCGCCAGCCTGCGCCGGACCCGGACGGAGACCACGGCCAGGCGTGCGACCACGGCGGACGGCGCCTTCTGGGAA GAGGTTCCGGCCACGGCCCTGCGCGCCGGCGACCTCGTGGTGGTGGAGGCCGGCGACACCATTCCCGGCGACGGGGAGGT GGTGGAAGGGATCGCCACCGTGAACGAGAGCGCCATCACCGGGGAGTCCGCTCCCGTGATCCGGGAATCGGGCGGCGACC GTTCCGCCGTCACCGGCGGTACGGTGGTGGTCTCCGACCGCATCGTCGTGCGCATCACCGCGAACCCGGGGGAGAGCTTC CTCGACCGCATGATCGCGCTGGTCGAAGGCGCCAAGCGGCAGAAGACACCCAACGAGATCGCCCTGACCATCCTGCTGGT CGGCATGACCATCATCTTCCTGCTGGTGACGGTCACGCTGCAAGGGTTCGCCGGCTATTCCGGCTTCCTGATCCCGGTCG TCTTCCTGATCGCGCTGCTGGTCACGCTGATCCCGACCACCATCGGCGGGCTGCTGTCCGCCATCGGCATCGCCGGCATG GACCGGCTGGTGAAGTTCAATGTCATCGCCAAGTCCGGCCGGGCGGTGGAGGCGGCCGGCGACGTGGGCGTGCTGCTGCT GGACAAGACCGGAACCATCACCCTGGGTAACCGCCAGGCGACGGAGTTCCTGCCGCTCGGCGGGGTGCATGAGCGGGAGC TGGGCGAAGCGGCCCTGCTCGCCTCGCTGGCCGACGACACGGCGGAGGGCCGCTCCATCGTGGCGCTCGCCCGCCAGAAG TTCCGCTTCTCCGCGGATTCCTTCGATCCGCGGGGTCTGGATTTCATCCCCTTCACCGCCCAGACGCGGATGAGCGGGGT GAACATCGGTCCGCGGTGCATCCGCAAAGGAGCGGTGGACACCATGCGGGCCTGGGTGGAGGCGCAGTCTTCCATCGGTT ACGCACCGGGCCGTGAACTGGCCCAGCGGGTGGAACAGGTCGCCCGGTCCGGCGGCACGCCGCTGGTGGTGGCGGACGGC GCCCGTGTGCTGGGCGTCGTCCACCTGAAGGACATCGTGAAGCCCGGAATCCGCGAGCGGTTCACCACCCTGCGGGAGAT GGGCATCCGTACCGTGATGATCACCGGCGACAACCCGCTGACCGCCGCCGCCATCGCGGCGGAGGCCGGGGTGGACGATT TCCTGGCGGAAGCCACCCCGGAGAAGAAGCTGGAGCTGATCCGGCAGTATCAGGCGGAAGGCAGGTTGGTCGCCATGTGC GGCGACGGGTCGAACGACGCTCCCGCCCTGGCCCAGGCCGATGTCGGTGTCGCCATGAACACCGGCACCCAGGCCGCGCG GGAAGCCGGCAACATGGTCGATCTGGACAGCGATCCCACCAAGCTCATCGAGATCGTCATGATCGGCAAGCAGCTCCTGA TGAGCCGCGGAGCGCTGACCACCTTCTCCATCGCCAACGACGTGGCGAAGTACTTCGCCATCATTCCGGCCCTGTTCGTC GCGGCCTACCCGCCGCTCCAGGCGCTCAACATCATGGGGCTGGAAAGCCCGGCCAGCGCCATCCTGTCGGCCATCATCTT CAACGCCCTGGTGATCCTGTTCCTGATCCCGCTGGCGCTGAGGGGTGTCGCCTACCGCCCGGCCCCGGCAGCCACCCTGC TGGCGCGCAACCTCGCCCTCTACGGCGTGGGCGGCCTCGTCGTGCCGTTCCTCGGCATCAAGGCGATCGACCTCGCCATC ACCAGCCTCGGCCTCGTCTGA Protein sequence : MTDPVKRAEAAHRRVWRRYMKDNSAPVLNSTQATLLDGRIARQALGEAFLKLDPRRLVRNPVMFVTAVVALLTTLIFVRD LVTGGSALASREIASWLLLTGGDPSITGQIAAWLWFTVLFANFAEAVAEGRGKAQAASLRRTRTETTARRATTADGAFWE EVPATALRAGDLVVVEAGDTIPGDGEVVEGIATVNESAITGESAPVIRESGGDRSAVTGGTVVVSDRIVVRITANPGESF LDRMIALVEGAKRQKTPNEIALTILLVGMTIIFLLVTVTLQGFAGYSGFLIPVVFLIALLVTLIPTTIGGLLSAIGIAGM DRLVKFNVIAKSGRAVEAAGDVGVLLLDKTGTITLGNRQATEFLPLGGVHERELGEAALLASLADDTAEGRSIVALARQK FRFSADSFDPRGLDFIPFTAQTRMSGVNIGPRCIRKGAVDTMRAWVEAQSSIGYAPGRELAQRVEQVARSGGTPLVVADG ARVLGVVHLKDIVKPGIRERFTTLREMGIRTVMITGDNPLTAAAIAAEAGVDDFLAEATPEKKLELIRQYQAEGRLVAMC GDGSNDAPALAQADVGVAMNTGTQAAREAGNMVDLDSDPTKLIEIVMIGKQLLMSRGALTTFSIANDVAKYFAIIPALFV AAYPPLQALNIMGLESPASAILSAIIFNALVILFLIPLALRGVAYRPAPAATLLARNLALYGVGGLVVPFLGIKAIDLAI TSLGLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-165 | 60 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-165 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 4e-138 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-136 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-136 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-136 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-136 | 55 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-136 | 55 |
