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Name : cbbT (RC1_4067) Accession : YP_002300218.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 4288250 - 4290313 bp Length : 2064 bp Strand : + Note : identified by match to protein family HMM PF01654 DNA sequence : ATGACCGCGACCGCAGAGGCCGGCGCACAGGAAGCCCTTGCCCCGACGATGCCCGACCCCCTGTCCCCGGCGGAGCGTCG GCACCTTGCCAACGCGCTGCGGGTGCTGGCGATCGACGCGGTGGAGGCGGCCAAGTCCGGCCACCCCGGCATGCCCATGG GCATGGCCGACATCGCCGAGGCGCTGTGGCGCCGTCACCTGCGCCACAACCCGGCCGATCCGGCCTGGCCGGACCGTGAC CGCTTCGTGCTGTCGAACGGCCACGGCTCGATGCTGCTCTACGGTCTGCTGCACCTCACCGGCTACGACCTGCCGATCGA GGAGCTGAAGCGGTTCCGCCAGCTCCACTCCAAGACGCCGGGCCACCCCGAATACGGCCTCACGCCGGGCGTGGAGACGA CGACCGGCCCGCTCGGCCAGGGCATCGCCAACGCCGTCGGCATGGCGCTGGCCGAGCGCCTGCTGGCGGCCGAGTTCAAC CGGCCGGACCACACCATCGTCGATCACCGCACCTTCTGCTTCGTCGGCGACGGCTGCCTGATGGAGGGTCTCAGCCACGA GGTCTGCTCGCTCGCGGGCACGCTGGGGCTGGAGAAGCTGGTCGTGCTCTATGACGACAACGGCATCTCCATCGACGGCC ATGTCGTCGGCTGGTTCGCCGACGACACGCCGAAGCGGTTCGAGGCCTATGGCTGGCGCGTCATCCGCGACGTGGACGGG CACGACGCGGCGGCGCTGGACCGGGCGCTGGCCGAGGCGGTGACACCCTGCGGCAAGCCCACCCTGATCTGCTGCAAGAC CGTCATCGGCTGGGGCAGCCCGGCCAAGGCCGGCACCCACGATGTCCACGGCGCGCCCCTGGGGGCCGCCGAGTCCGCCG CCGCCAAGGCGGAGATGGGCTGGACCGCGGCCCCGTTCGAGATCCCCGAGGACGTGCGCGCCGGCTGGGACGCGCGCGGC CGCGGCGCCGCCCTGGAGGGCGCGTGGCAGGAGCGGTTCCGCCGTTATGCCGAGGCGCACCCCGATCTGGCGGCCGAGTT CACCCGCCGCGTCTCGGGCGAGCTGCCGGCGGACTTCGCCAGGGCGGCCGACGCCTGGATCGCGGAGACGGCGGCCCGCA CCGACACCGTCGCCACCCGCAAGGCCTCGCAGCAGGCGATCCAGGCCCTGGCCGGCCTGCTGCCGGAGATGCTGGGCGGC TCGGCCGACCTGACCGGCTCCAACCTCACCGACTGGAAGGGTTCCGCCTCGGTCCGCATGACCGGCGGCGGCAGCTACGT GCATTACGGCGTGCGCGAGTTCGGCATGACCGCGATGATGAACGGCGTGGCGCTGCATGGTGGCTACCTGCCGTTCGGCG GCACTTTCCTGGTCTTCTCCGACTATGCCCGCAACGGCCTGCGGCTGGCCGCCCTGATGGGGCTGCGCGTCGTCCATGTG CTGACGCACGACAGCATCGGCCTGGGCGAGGACGGGCCGACCCACCAGCCGATCGAGCACGCCGCCAGCCTGCGGCTGAT GCCCAACATGGATGTCTGGCGGCCCTGCGATGCGCTGGAGACGGCGGTCGCGTGGCGTACCGCCGTGGAGCGCCACACCG GCCCGAGCTGCCTGCTGCTGTCCCGGCAGGGGCTGCCGGCGCAGAGCGGCCCCGGCCGGACCGACGGCGCCGCCCGCGGC GGCTATGTGCTGGCGGAGGCCGATGGCGGCAGGCCGGACGTGGTGCTGATCGCCACCGGCTCCGAGGTGCAGGTGGTGAT GGAGGCCAGGACGGTGCTGGCCGGGCGCGGCATCGCGGCGCGGGTCGTCTCCATGCCCTGCTGCGAGCTGTTCGACCGCC AGGACGAGGCGTGGAAGGCGTCCGTGCTGCCCGCCGGCGTGCCGCGCATGGCCGTGGAGGCCGGGGCCCCCGACCTCTGG CGCAAGTATGTCGGCCTGGACGGCGACGTGGTGGGCATCGCGCGCTTCGGCGAATCCGCCCCGGCCGGCGACCTCTACCG CTTCTTCGGCCTCACGGCCGATGCCGTGGCGCAGCGCACGGCGCGGCTGCTGGGCCGCGTCTGA Protein sequence : MTATAEAGAQEALAPTMPDPLSPAERRHLANALRVLAIDAVEAAKSGHPGMPMGMADIAEALWRRHLRHNPADPAWPDRD RFVLSNGHGSMLLYGLLHLTGYDLPIEELKRFRQLHSKTPGHPEYGLTPGVETTTGPLGQGIANAVGMALAERLLAAEFN RPDHTIVDHRTFCFVGDGCLMEGLSHEVCSLAGTLGLEKLVVLYDDNGISIDGHVVGWFADDTPKRFEAYGWRVIRDVDG HDAAALDRALAEAVTPCGKPTLICCKTVIGWGSPAKAGTHDVHGAPLGAAESAAAKAEMGWTAAPFEIPEDVRAGWDARG RGAALEGAWQERFRRYAEAHPDLAAEFTRRVSGELPADFARAADAWIAETAARTDTVATRKASQQAIQALAGLLPEMLGG SADLTGSNLTDWKGSASVRMTGGGSYVHYGVREFGMTAMMNGVALHGGYLPFGGTFLVFSDYARNGLRLAALMGLRVVHV LTHDSIGLGEDGPTHQPIEHAASLRLMPNMDVWRPCDALETAVAWRTAVERHTGPSCLLLSRQGLPAQSGPGRTDGAARG GYVLAEADGGRPDVVLIATGSEVQVVMEARTVLAGRGIAARVVSMPCCELFDRQDEAWKASVLPAGVPRMAVEAGAPDLW RKYVGLDGDVVGIARFGESAPAGDLYRFFGLTADAVAQRTARLLGRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 61 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-180 | 59 |
