Gene Information

Name : RC1_3283 (RC1_3283)
Accession : YP_002299457.1
Strain : Rhodospirillum centenum SW
Genome accession: NC_011420
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3383386 - 3384081 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
ATGGGCGACGCACTGATCCGGCTGACCGAAGTCTCCAAGCGCTTCATCAAGGCGAAGGAGACGATCACCATCTTCGACCG
CCTGGACATGGCGATCCCGCGCGGCGATTTCGTCGCCGTCATGGGACCCAGCGGGTCGGGCAAGACGACGCTGCTGAACC
TGCTGGGCGGCATCGACCGGCCGACCTCCGGCGCGGTCCAGTTCGACGGCGTGCGCATCGACGGCCTGTCGGAAGGGGCG
CTGGCCGACTGGCGCGCCGCCAATGTCGGCTTCATCTTCCAGTTCTACAACCTGATGCCGATGCTGACGGCGGCGCGGAA
CGTGGAACTGCCGCTGCTGCTGACCCGCCTGGACGCGGCCGAGCGGCGGCGGCGGGTGGAGATCGCGCTGCGGCTGGTGG
ATCTGGGCGACCGCATGGGCCACTACCCGCGGGAGATGTCGGGCGGCCAGATGCAGCGCGTCGCCATCGCCCGCGCCGTC
GTCTCCGACCCCAAGATGCTGCTCTGCGACGAACCGACGGGCGATCTCGACCGCACCACGGCGGACGAGATCCTGCGGAT
GCTGCAACTGCTGAACCGGGAGATGGGCAAGACCATCGTCATGGTCACCCACGACCCGGAGGCCGCCCGCTACGCCCGCC
GCGTCCTGCACCTGGACAAGGGGCAGTTCGTCGAGCGCGACCTGGACGCGGCCTGA

Protein sequence : 
MGDALIRLTEVSKRFIKAKETITIFDRLDMAIPRGDFVAVMGPSGSGKTTLLNLLGGIDRPTSGAVQFDGVRIDGLSEGA
LADWRAANVGFIFQFYNLMPMLTAARNVELPLLLTRLDAAERRRRVEIALRLVDLGDRMGHYPREMSGGQMQRVAIARAV
VSDPKMLLCDEPTGDLDRTTADEILRMLQLLNREMGKTIVMVTHDPEAARYARRVLHLDKGQFVERDLDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RC1_3283 YP_002299457.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-37 47
RC1_3283 YP_002299457.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-44 46