Gene Information

Name : phoB (RC1_3267)
Accession : YP_002299441.1
Strain : Rhodospirillum centenum SW
Genome accession: NC_011420
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3369171 - 3369875 bp
Length : 705 bp
Strand : +
Note : Part of a pho operon.DNA-binding response regulator

DNA sequence : 
ATGAACTCAGCCCTGAAGCCCCTGATCCTGATCGTCGAGGATGAGGCGGATCTCGTCACCCTGCTGAAGTACAATCTGGA
GAAGGAGGGGTTCCGCGTCATCTCCGCCAGCGACGGGGAGGAGGCGCTGCTGCTGGCCAACGAGCAGGCGCCGCATCTGG
TGCTGCTGGACTGGATGCTGCCGCTGATGAGCGGGCTGGAGGTCTGCCGCCAGCTCCGGCGCAACCCGAAGACCCGCGAC
ACGCCCGTCATCATGCTGACCGCCCGCGGCGAGGAGGCGGACAAGGTCCGCGGGCTGAACAGCGGGGCGGACGACTACAT
CGCCAAGCCGTTCAGCCCGACCGAGCTGGTCGCCCGCATGCGCGCGGTGCTGCGCCGCGCGGCACCGGGGCTGGCGGAGG
AGCTGCTGCGCTTCGCCGACGTGGTGATGGATCTGGCCGCGCACCGGGTCCGCCGCAACGGCCGCGACGTGCATCTGGGG
CCGACGGAGTTCCGCCTGCTGCGCCACTTCATGCAGCACCCCGGCCGGGTCTTCAGCCGCGAGCAGCTCCTGGACGTGGT
CTGGGGGCACGACGTCTATGTCGAGCCGCGCACCGTGGACGTCCACATCCGGCGCCTGCGCAAGGCGCTGAACGAGACCG
ACGACCAGGACCTGATCCGCACCGTCCGCTCGGCCGGCTACGCGCTCGACCAGAACACGCTCTGA

Protein sequence : 
MNSALKPLILIVEDEADLVTLLKYNLEKEGFRVISASDGEEALLLANEQAPHLVLLDWMLPLMSGLEVCRQLRRNPKTRD
TPVIMLTARGEEADKVRGLNSGADDYIAKPFSPTELVARMRAVLRRAAPGLAEELLRFADVVMDLAAHRVRRNGRDVHLG
PTEFRLLRHFMQHPGRVFSREQLLDVVWGHDVYVEPRTVDVHIRRLRKALNETDDQDLIRTVRSAGYALDQNTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-31 43
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 1e-26 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB AE000516.2.gene3505. Protein 4e-38 46
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_011595.7057856.p0 Protein 8e-30 43
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_010400.5986590.p0 Protein 3e-29 43
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_010410.6002989.p0 Protein 8e-30 43
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene2815. Protein 5e-36 43
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB CP000647.1.gene2531. Protein 1e-30 43
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_013450.8614146.p0 Protein 8e-31 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_002951.3238224.p0 Protein 8e-31 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_007793.3914065.p0 Protein 8e-31 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_002758.1121390.p0 Protein 8e-31 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_010079.5776364.p0 Protein 8e-31 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB AE015929.1.gene1106. Protein 3e-26 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_002952.2859858.p0 Protein 8e-31 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_007622.3794948.p0 Protein 8e-31 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_003923.1003417.p0 Protein 8e-31 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB CP004022.1.gene3215. Protein 7e-24 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB CP000034.1.gene2186. Protein 7e-30 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB BAC0039 Protein 7e-30 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_002695.1.916589.p Protein 7e-30 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB CP001918.1.gene3444. Protein 1e-29 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_012469.1.7685629. Protein 6e-33 41
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB BAC0125 Protein 2e-27 41
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB FJ349556.1.orf0.gene Protein 7e-33 41
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB AE016830.1.gene1681. Protein 3e-33 41
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB NC_002695.1.915041.p Protein 1e-20 41
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB CP000034.1.gene3834. Protein 1e-20 41
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB BAC0596 Protein 5e-29 41
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB CP001138.1.gene2239. Protein 5e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB VFG1702 Protein 2e-31 43
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB VFG1386 Protein 2e-29 43
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB VFG1563 Protein 2e-30 42
phoB YP_002299441.1 phosphate regulon transcriptional regulatory protein PhoB VFG1390 Protein 6e-30 41