Gene Information

Name : rph (RC1_2960)
Accession : YP_002299140.1
Strain : Rhodospirillum centenum SW
Genome accession: NC_011420
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3037789 - 3038508 bp
Length : 720 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGTCCCGCCCCTCCGGCCGTTCCCTCGACCAGATGCGCCCCGTGAGCCTGGAGACGAACGTCTCCAAGCATGCCGAAGG
CTCGTGCCTCGTGCGGTTCGGGGACACGCACGTCCTCTGCACCGCCAGCGTCGAGGACCGCGTGCCGCCCTTCCTGCGCG
GCCAGGGCCAGGGCTGGGTGACGGCCGAATACGGCATGCTGCCCCGCGCCACGGCCGAGCGCACCGACCGCGAGGCGGCC
AAGGGCCGGCAGACCGGCCGCACCCAGGAGATCCAGCGCCTGATCGGCCGCTCGCTGCGCGCCGTCACCGACGTGAAGGC
GATGGGCGAGATCACCGTGAAGATCGACTGCGACGTGCTCCAGGCCGACGGCGGCACCCGCACGGCGGCCATCACCGGCA
GCTATGTCGCGCTGGCGCTGGCCTTCCGGCATCTCACCTCGATCGGCTTCCTGAAGGCGCAGCCGCTGACCGACAGCGTC
GCCGCCGTCTCCTGCGGGCTGTACCAGGGCGCGCCGGTGCTGGACCTCGACTATGCCGAGGACAGCAGCGCCCAGGCCGA
CGCCAACTTCGTGCTGACCGGCAAGGGCGGCATCGTGGAGATCCAGGGCACGGCCGAGAAGACGCCCTTCCAGGAGGCCG
AGTTCCTGGCGCTGCTCGCGCTGGCGCGCAAGGGCATCGGCGAGCTGACGGCGCTCCAGGCGGCGGCACTGGCCCGATGA

Protein sequence :
MSRPSGRSLDQMRPVSLETNVSKHAEGSCLVRFGDTHVLCTASVEDRVPPFLRGQGQGWVTAEYGMLPRATAERTDREAA
KGRQTGRTQEIQRLIGRSLRAVTDVKAMGEITVKIDCDVLQADGGTRTAAITGSYVALALAFRHLTSIGFLKAQPLTDSV
AAVSCGLYQGAPVLDLDYAEDSSAQADANFVLTGKGGIVEIQGTAEKTPFQEAEFLALLALARKGIGELTALQAAALAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-47 54