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Name : RC1_2952 (RC1_2952) Accession : YP_002299132.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Resistance Product : drug resistance transporter Bcr Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 3028753 - 3029955 bp Length : 1203 bp Strand : + Note : - DNA sequence : ATGACCAGCACACGCCCCGCGTGGGCCTTTACGCTGCCGGCAGCCCTGCTGCTGATGGCTCCCTTCGACATCCTCGCTTC CCTGGCGATGGACATCTATCTCCCCGTCGTTCCGGCGATGCCTGCCGCCCTGGACACGACGCCCTCCGTGATCCAGCTCA GCTTGAGCCTCTACATGGCGATGCTCGGCGTGGGGCAGGTGATCTTCGGCCCGATCTCGGATCGCCTCGGGCGGCGGCCG GTCCTGCTTGCGGGGGGCGCGCTCTTCGTCGCCGCGTCCCTCGGGGCGGCAGGCTCGCCGACGGCCGCGGTCTTTGTCGC CTTCCGCCTGCTTCAGGCGGTCGGGGCGTCGGCGGCGCTGGTGGCGACGTTCGCGGCGGTGCGCGACGTCTATGCCGGCC GGCCCGAGGGCGTCGTCATCTACGGGCTTTTCAGTTCGATCCTGGCCTTCGTCCCCGCCCTCGGCCCCATCGCCGGAGCC TTGATCGGCGGGGTCTTCGGATGGCGGGCGATCTTCGTCACGCTGGCCGCCCTGGCGCTGCCCGCGCTTCTGAATGCCGG CGTCAGATGGCCCGAAACCCGGCCGCCCGCAACCCGCCTGCCGGATGATGCGACGCGGCGCCGGTCCGTTCTGCCGGTTT TCGCCAGCCCGGCCTTCTGGGTCTACACGGCCGGCTTCAGCGCCGGCATGGGCACCTTCTTCGTCTTCTTCTCGACGGCC CCCCGCGTGCTGATAGACAGGGCGGGCTGGTCGGAGATCGGGTTCAGCCTGGCCTTCGCCACGGTCGCGGTCGTCATGAT CGGGACCACCCGGTTCGCCCGGTCCTTCGTCGCCCGGTGGGGCATCCCGGGTTGCGTGGCGCGCGGGATGGCGCTGCTCG TCTGCGGGTCTGCCCTGCTGGCGATCGGCGAAGTCTCCGGCCCGCCGTCCTTTCTCGGCTACATCCTGCCGATGTGGGTC ATGGCGGTCGGCATCGTCTTCACGGTGTCCGTGACCGCCAACGGCGCGCTTGCACCGTTCGACGACATCGCGGGATCGGC CGTCGCGCTCTACTTCTGCGTCCAGAGCCTGATCGTCAGCCTTGCCGGGACCGCGGCGGCGACGCTGCTGAACGGCGACA CGGCCTGGCCCGTGATCGGCTACGCCACGACGATGGCGCTGCTGGTGTCCGCGGGGCTGGCGTGGCTTCGATCCCGGCCG TGA Protein sequence : MTSTRPAWAFTLPAALLLMAPFDILASLAMDIYLPVVPAMPAALDTTPSVIQLSLSLYMAMLGVGQVIFGPISDRLGRRP VLLAGGALFVAASLGAAGSPTAAVFVAFRLLQAVGASAALVATFAAVRDVYAGRPEGVVIYGLFSSILAFVPALGPIAGA LIGGVFGWRAIFVTLAALALPALLNAGVRWPETRPPATRLPDDATRRRSVLPVFASPAFWVYTAGFSAGMGTFFVFFSTA PRVLIDRAGWSEIGFSLAFATVAVVMIGTTRFARSFVARWGIPGCVARGMALLVCGSALLAIGEVSGPPSFLGYILPMWV MAVGIVFTVSVTANGALAPFDDIAGSAVALYFCVQSLIVSLAGTAAATLLNGDTAWPVIGYATTMALLVSAGLAWLRSRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 1e-110 | 81 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 1e-110 | 81 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 1e-110 | 81 |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 5e-107 | 81 |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 2e-108 | 80 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 2e-108 | 80 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 4e-61 | 51 |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 2e-61 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RC1_2952 | YP_002299132.1 | drug resistance transporter Bcr | AF156486.gene.p01 | Protein | 3e-60 | 50 |
| RC1_2952 | YP_002299132.1 | drug resistance transporter Bcr | DQ522237.1.gene4.p01 | Protein | 1e-61 | 50 |
| RC1_2952 | YP_002299132.1 | drug resistance transporter Bcr | NC_010410.6003586.p0 | Protein | 1e-61 | 50 |
| RC1_2952 | YP_002299132.1 | drug resistance transporter Bcr | AF294653.1.gene4.p01 | Protein | 3e-61 | 50 |
| RC1_2952 | YP_002299132.1 | drug resistance transporter Bcr | DQ984668.gene.p01 | Protein | 1e-61 | 50 |
