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Name : clpB (RC1_2633) Accession : YP_002298820.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2708047 - 2710692 bp Length : 2646 bp Strand : - Note : Gene symbol synonym htpM DNA sequence : ATGGACTTCAAGAAGTATACCGAGCGCGCGCAGGGCTTCGTCCAGGCGGCGCAGGCGCTGGCATTGCGCAGCGGGCATCA GCAGCTCGCCCCCGAACACATGCTCAAGGTCCTGCTCGACGACGAGGAGGGGCTGGCCGCCAACCTGATCCGCGCGGCCG GCGGCGACCCGGCGCGGGCGCTGGCCGGGGTGGAGCGCGAGCTTGCCCGCATCCCGAAGGTCGAAGGGCCGGGCGCCGGG GGCGTCGCCCTCAGCCGCGAACTGGCGCGGGTCTTCGCCACCGCCGAGGAGGTGGCGCAGAAGGCCGGCGACAGCTTCGT CACGGCCGAGCGGCTGCTGCTGGCCATCGCCCTGACCACCGGCACGCCGGCTGCCAAGGCGCTGGCCGACGCCGCCGTCA CCCCGCAGGGGCTGAACGGCGCCATCAACGAGATCCGCAAGGGCCGCACGGCCGACAGCGCCAACGCCGAACAGTCCTAC GACGCGCTGAAGAAGTACGCCCGCGACCTGACCCAGGCGGCGCGCGAGCAGAAGCTCGACCCCGTGATCGGCCGCGACGA GGAAATCCGCCGCACCATCCAGGTGCTGGCCCGGCGCACCAAGAACAACCCCGTCCTGATCGGCGAGCCCGGCGTGGGCA AGACCGCCATCGTCGAGGGGCTGGCCCAGCGCATCGTCAACGGCGACGTGCCGGAGGGGCTGAAGCGCAAGCGCATCCTC TCGCTCGACCTCGGCGCCCTGGTCGCCGGGGCCAAGTTCCGCGGCGAGTTCGAGGAACGGCTGAAGGGCGTGCTGCAGGA AATCCAGGCCGCGGCCGGGGAGATCGTCGTCTTCATCGACGAGCTGCACACCCTGGTCGGCGCCGGCAAGGCCGAAGGGG CGATGGACGCCTCCAACATGCTGAAGCCGATGCTGGCCCGCGGCGAGCTGCACTGCGTCGGCGCCACCACGCTGGATGAG TACCGCAAGTACATCGAGAAGGACGCCGCGCTGGCCCGGCGCTTCCAGCCCGTCTTCGTGGACGAGCCCTCGGTGGAGGA CACCATCTCCATCCTGCGCGGGCTGAAGGAGAAGTACGAGGTCCATCACGGCGTGCGGATCACCGACGGCGCCATCGTCG CCGCCGCCACCCTGTCCAACCGCTACATCACCGACCGCTTCCTGCCGGACAAGGCCATCGACCTGATCGACGAGGCGGCC AGCCGCCTGCGCATGGTCGTCGACTCGAAGCCGGAGGCGATCGACGAGCTGGACCGCAGCATCATCCGCCTGAAGATCGA GCGCGAGGCCCTGAAGCGGGAGACCGACAGCGCCTCGCGCGAGCGGCTGGAGAAGCTGGAGGAGGAGCTGTCGGCGCTGG AGCAGCGCTCGGCCGAGCTGACGGCCCAGTGGCAGGCGGAGAAGGAGACCCTGACCGGCGCCCAGAAGCTGAAGGAACAG CTCGAGGCCGCCCGGGCCGAGCTGGACCAGGCGCAGCGGGCGGGCAACTGGGCCCGCGCCGGGGAACTGACCTACGGCGT CATCCCCGAGCTTGAGAAGAAGCTGGCCGGTGCCCAGGAGGCCAACCAGCACCGCATGCTGAACGAGGAGGTGCGCGACC AGGACATCGCCGCCGTCGTCAGCCGCTGGACCGGCATCCCGGTGGACCGGATGCTGGCCGGCGAGCGCGAGAAGCTGCTG AAGATGGAGGAGAAGCTGCGCACCCGCGTGGTCGGCCAGGACGAGGCGATCGTCGCCGTCTCCAACGCCGTCCGCCGCGC CCGCGCCGGCCTGCAGGACCCGAACCGGCCGATCGGCAGCTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAGC TGACCAAGGCCCTGGCCGGGTTCCTGTTCGACGACGAGACCGCCATGGTCCGCCTGGACATGTCGGAATACATGGAGAAG CACTCCGTCGCCCGCATGATCGGCGCGCCCCCGGGCTATGTCGGTTACGAGGAGGGCGGGGCGCTGACCGAGGCGGTGCG CCGCCGGCCCTATCAGGTGATTCTGTTCGACGAGGTGGAGAAGGCCCACCCCGACGTCTTCAACGTGCTGCTCCAGGTGC TGGACGACGGCCGCCTGACCGACGGTCAGGGCCGCACGGTGGACTTCCGCAACACGCTCATCGTGATGACCTCCAACCTC GGCTCGCAGTTCCTGGCCGAACTGCCGGAGGGGGCGGACAGCGCCGCCGCGCGGGCGCAGGTGATGGAGGTGGTGCGCGG CGCCTTCCGGCCGGAGTTCCTGAACCGGCTGGACGAGATCCTGCTGTTCCACCGCCTGTCGCGTGAGCACATGACCGGCA TCGTGGACATCCAGCTCGACCGGCTGCGCCGGATGCTGGCCGACCGCGCCATCACCCTGGAACTGGACGAGGCGGCCCTG CGCTGGCTGGCCGATGCCGGCTACGACCCGGTCTACGGCGCCCGGCCGCTGAAACGGGTGATCCAGCGCGAACTGCAGAA CCCGCTGGCGACCCGCATCCTGGAAGGCCGGATCGCGGACGGGCAGACGGTGCCCGTCACCGCCGGCCCCGACGGGCTGC TGATCGACGGCGAGGCGGTGGACGAGAGCATGCCGCCCCCGGCCGGGCGCTGGGGCGGCCCGGCGCGCCCGACGACTCTG CACTGA Protein sequence : MDFKKYTERAQGFVQAAQALALRSGHQQLAPEHMLKVLLDDEEGLAANLIRAAGGDPARALAGVERELARIPKVEGPGAG GVALSRELARVFATAEEVAQKAGDSFVTAERLLLAIALTTGTPAAKALADAAVTPQGLNGAINEIRKGRTADSANAEQSY DALKKYARDLTQAAREQKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEGLKRKRIL SLDLGALVAGAKFRGEFEERLKGVLQEIQAAAGEIVVFIDELHTLVGAGKAEGAMDASNMLKPMLARGELHCVGATTLDE YRKYIEKDAALARRFQPVFVDEPSVEDTISILRGLKEKYEVHHGVRITDGAIVAAATLSNRYITDRFLPDKAIDLIDEAA SRLRMVVDSKPEAIDELDRSIIRLKIEREALKRETDSASRERLEKLEEELSALEQRSAELTAQWQAEKETLTGAQKLKEQ LEAARAELDQAQRAGNWARAGELTYGVIPELEKKLAGAQEANQHRMLNEEVRDQDIAAVVSRWTGIPVDRMLAGEREKLL KMEEKLRTRVVGQDEAIVAVSNAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAGFLFDDETAMVRLDMSEYMEK HSVARMIGAPPGYVGYEEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNL GSQFLAELPEGADSAAARAQVMEVVRGAFRPEFLNRLDEILLFHRLSREHMTGIVDIQLDRLRRMLADRAITLELDEAAL RWLADAGYDPVYGARPLKRVIQRELQNPLATRILEGRIADGQTVPVTAGPDGLLIDGEAVDESMPPPAGRWGGPARPTTL H |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002298820.1 | ATP-dependent chaperone protein ClpB | VFG0079 | Protein | 1e-167 | 48 |
| clpB | YP_002298820.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 5e-107 | 43 |
| clpB | YP_002298820.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 2e-100 | 42 |
