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Name : RC1_0233 (RC1_0233) Accession : YP_002296495.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein I Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 219046 - 220032 bp Length : 987 bp Strand : - Note : identified by match to protein family HMM PF00128 match to protein family HMM PF02922 match to protein family HMM TIGR02100 DNA sequence : ATGGGCATGAAGGTACTTGTCACGGGCGTCGCGGGGTTCATCGGTTTCCATCTGGCCCAGGCCCTGCTGGACCGCGGCGA CACTGTCGTCGGCGTGGACAACCTCAACGACTACTACTCCACCGCCCTGAAGCAGGACCGGCTGGCCCTGCTCCGGCAGC GGGAGGGGTTCCACTTCCAGCATCTGAACATCGCCGACCGCGACGGCATGGCGGCGCTGGCGGCGGCCCACCCCGACACC GCCGCGATCGCCCATCTGGCAGCGCAGGCCGGCGTGCGCTATTCGCTGACCGACCCTTTCGCCTATGTCGAATCGAACCT GATGGGCCATGTCGTCATGCTGGAGACGGCACGGCGGTTCGAAGGGTTGCGTCACCTCGTCTACGCTTCCTCCTCCTCGG TCTACGGACTCAGCGAGGCGCATCCTTTTTCCCTCGACGACAGGGCGGACCGTCCGGCTTCGCTCTACGGAGCGACCAAG CGGGCCGATGAGCTGATCAGCCATTCCTACAGCCACATCCACCGCATTCCACAGACAGGCCTGCGCTTCTTCACGGTCTA CGGCCCCTGGGGACGTCCGGACATGGCGCTGTTCCTGTTCACCCGCGCCATCCTGGCGGGGGAGCCGATCGAGCTGTTCA ACCATGGCAGGCTTCAGCGCGACTTCACCTACATCGACGATATCATCGCCGGCGTGGTGCGCGCCCTCGACCGCCCGCCG CCGGTGGTAGAGGGGGCCGTGCCGCACCGGGTGTTCAACCTGGGCAACAACACGCCCGTGGAACTGGAGCGCTTCGTCGC CGTGCTGGAGGATGCGCTGGGTCTGAAGGCGCGGCGGCACCTCGCACCGATGCAGCCGGGCGACGTGCTTTCGACTCATG CGGACATCGAGGAAAGCCGGCGCGTGCTGGGTTTCGAGCCCAGCACGCCGATTGAGGCCGGCATCGGGCGCTTCGTGGAC TGGTATCGGGCCTACTACCGGGTCTGA Protein sequence : MGMKVLVTGVAGFIGFHLAQALLDRGDTVVGVDNLNDYYSTALKQDRLALLRQREGFHFQHLNIADRDGMAALAAAHPDT AAIAHLAAQAGVRYSLTDPFAYVESNLMGHVVMLETARRFEGLRHLVYASSSSVYGLSEAHPFSLDDRADRPASLYGATK RADELISHSYSHIHRIPQTGLRFFTVYGPWGRPDMALFLFTRAILAGEPIELFNHGRLQRDFTYIDDIIAGVVRALDRPP PVVEGAVPHRVFNLGNNTPVELERFVAVLEDALGLKARRHLAPMQPGDVLSTHADIEESRRVLGFEPSTPIEAGIGRFVD WYRAYYRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-75 | 46 |
