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Name : RC1_2026 (RC1_2026) Accession : YP_002298232.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photolyase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : - Position : 2079932 - 2081401 bp Length : 1470 bp Strand : + Note : identified by match to protein family HMM PF00140 match to protein family HMM PF03979 match to protein family HMM PF04539 match to protein family HMM PF04542 match to protein family HMM PF04545 match to protein family HMM PF04546 match to protein family H DNA sequence : ATGCGCGCCACCCCCATCCTCGTCTGGTTCCGCCAGGACCTCCGCCTCGCCGACAATCCCGCCCTGAGCGACGCCGCCCG CAGCGGCCGCCCGGTCGTGCCGGTGTTCGTCCTGGACGACGACACCCCCGGCGGCTGGCGGCCGGGCGGCGCGTCGCGCT GGTGGCTGCACCACAGCCTGGCATCCCTGAGCCGGTCGCTGGCGACGGCAGGCTCGCCCCTGGTGCTGCGCCGCGGGCGC GCCGACGTGGCGATCGGGGAACTGGTGCGGGAGACCGGGGCCGGCACGGTTCTCTGGAACCGCTGCTACGAGCCCTGGGC GACGGAGCGGGACAGCCGGCTGAAGGCCGACCTGCGTGCCGCGGGCGTGGAGGTGAAAAGCTTCAACGGGTCGCTGCTGC GCGAGCCGATGACGGTCCGGACCGCGGCCGGGGAGCCCTACCGGGTCTTCACGCCGTTCTGGCGGGCCGTCTCTTCCAGC CCCGACTGGCCGGAGCCGCTGGCCGCGCCCGACCGGCTGGAAGCACCGCCGACGGCACCCGCATCCGATCCTCTGGAGTC CTGGGGCCTGCTGCCGACGACGCCCGACTGGGCCGGCGGGCTGCGGCAGGCGTGGCAGCCGGGAGAAGCGGCGGTGGCGG CCCGGCTCCGCGCCTTCCTGGAGGGCGCCGCCGCCGACTATGCCGAGGGACGCGACCGGCCCGGCAGCGACGGCACCTCC CGCCTGTCGCCCTACCTGCATTTCGGGGAAATCTCGCCCCGGCAGGTCTGGGCGGCGACGCGCGACGCGATGCTGTCCGG CAACCCACCCGAGCACCGGCGGCATGCGGAATCCTTCCTGCGCGAGTTGGGATGGCGCGAATTCTGCTACAACCTTCTGT ACCATTTCCCTAAACTTCCGGAACGGCCCCTGAACCCCCGTTTCGAGGACTTCCCGTGGCAGCCGGACAGCGCAGCACTG GATTCCTGGCAGCGCGGACGCACCGGCTATCCCATCGTCGATGCGGGCATGCGCCAGCTCTGGACCACGGGCTGGATGCA CAACCGTGTCCGCATGATCGTAGGCTCGTTCCTGGTGAAGCACCTGCTGCTGCCCTGGCAGGAGGGGCAGCGCTGGTTCT GGGACACGCTGGTGGACGCGGATCTGGCGAACAATGCCGCGGGCTGGCAGTGGATCGCCGGCTGCGGCGCCGACGCCGCC CCCTATTTCCGGGTCTTCAACCCGGTGCTGCAGGGCGGGAAGTTCGACCCCGACGGACGCTATGTCCGCCGCTGGGTGCC GGAGCTGGCCGCCCTGCCCGACACGCTGATCCATCAGCCCTGGACCGCCACCGCGGAGACCCTGCGGCGCGCCGGCATCC GGCTGGGCACGGACTATCCCGCCCCCTGCATCGAGCACAAGCGGGGCCGGGACCGCGCGCTGGCCGCCTTCGCCACGCTC AGGCAGGCGGGCGACGCCGCAGACGCCTGA Protein sequence : MRATPILVWFRQDLRLADNPALSDAARSGRPVVPVFVLDDDTPGGWRPGGASRWWLHHSLASLSRSLATAGSPLVLRRGR ADVAIGELVRETGAGTVLWNRCYEPWATERDSRLKADLRAAGVEVKSFNGSLLREPMTVRTAAGEPYRVFTPFWRAVSSS PDWPEPLAAPDRLEAPPTAPASDPLESWGLLPTTPDWAGGLRQAWQPGEAAVAARLRAFLEGAAADYAEGRDRPGSDGTS RLSPYLHFGEISPRQVWAATRDAMLSGNPPEHRRHAESFLRELGWREFCYNLLYHFPKLPERPLNPRFEDFPWQPDSAAL DSWQRGRTGYPIVDAGMRQLWTTGWMHNRVRMIVGSFLVKHLLLPWQEGQRWFWDTLVDADLANNAAGWQWIAGCGADAA PYFRVFNPVLQGGKFDPDGRYVRRWVPELAALPDTLIHQPWTATAETLRRAGIRLGTDYPAPCIEHKRGRDRALAAFATL RQAGDAADA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 4e-63 | 44 |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 9e-63 | 43 |
