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Name : RC1_1986 (RC1_1986) Accession : YP_002298193.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 2.5.1.48 Position : 2043599 - 2044762 bp Length : 1164 bp Strand : - Note : identified by match to protein family HMM PF04085 match to protein family HMM TIGR00219 DNA sequence : ATGACCGACCGCCCGAACCGCCACGGCTTCTCCACCCGCGCGATCCATGCCGGGCAGGAGCCCGACCCCGCCACCGGCGC CATCATGGTGCCGATCTACCAGACCTCGACCTACGTCCAGGAAAGCCCGGGCGTCCACAAGGGGTTCGAGTACAGCCGCA GCCAGAACCCGACCCGCTTCGCCTATGAGCGCTGCGTCGCCGACCTGGAGAGCGGCCACCGCGGCTTCGCCTTCGCCTCC GGCCTCGCGGGCGAGGCGACGGTGCTGGAACTGCTCGACAGCGGCAGCCATGTCGTCGCCACCGACGACATCTATGGCGG CAGCTACCGGCTGTTCGAGCGGGTGCGCAAGCGCACGGCCGGGCTGTCCTTCAGCTTCGTGGACGTCGCCGACCTCGCCG CCGTGGAGGCGGCGATCCGGCCCGAGACGCGCATGATCTGGGTCGAGACGCCGACGAACCCGCTGCTGAAGCTGGCCGAC CTGGAGGCGCTGGCCCAGCTCGGCCGGCGCCGCGGCCTCATCACGGTCTGCGACAACACCTTCGCCAGCCCGTGGGTGCA GCGCCCGCTGGAACTGGGCTTCGACATCGTCACCCACTCGGCCACCAAGTACCTGAACGGCCATTCCGACATGGTCGGCG GTCTGGTGGTGGTGCGGGAGGCGGGCGAGCTGTCCGACCGGCTGGGCTTCCTGCAGAACGCCGTCGGCGCCATCCAGGGG CCGTTCGACAGCTTCCTCGCCCTGCGCGGGCTGAAGACGCTGGCCCTGCGCATGGAGCGGCACTGCCAGAACGCCCTGGT CGTGGCGGAATGGCTGGAGCGGCACCCGGCCGTGGCGCGTGTGCGCTACCCGTTCCTGCCCAGCCATCCGCAGCACGAGC TGGCGCGGCGGCAGATGGCGGCCGGCGGCGGCATGGTCACCATCCATCTGAAGGGCGGGCTGGAGCCGGCCCGGCGCATG CTGGAGCGGACCGAACTGTTCGCCCTGGCCGAGAGCCTGGGCGGGGTCGAGAGCCTGATCGAGCACCCGGCGATCATGAC CCACGCCTCCATCCCCGCCGACCAGCGGGCGGCGCTGGGCATCGACGACGGCATGGTCCGCCTGTCCGTCGGCGTGGAGG AGGTGGACGACCTGCTGGCCGATCTGGAGCAGGCCCTGCGCTGA Protein sequence : MTDRPNRHGFSTRAIHAGQEPDPATGAIMVPIYQTSTYVQESPGVHKGFEYSRSQNPTRFAYERCVADLESGHRGFAFAS GLAGEATVLELLDSGSHVVATDDIYGGSYRLFERVRKRTAGLSFSFVDVADLAAVEAAIRPETRMIWVETPTNPLLKLAD LEALAQLGRRRGLITVCDNTFASPWVQRPLELGFDIVTHSATKYLNGHSDMVGGLVVVREAGELSDRLGFLQNAVGAIQG PFDSFLALRGLKTLALRMERHCQNALVVAEWLERHPAVARVRYPFLPSHPQHELARRQMAAGGGMVTIHLKGGLEPARRM LERTELFALAESLGGVESLIEHPAIMTHASIPADQRAALGIDDGMVRLSVGVEEVDDLLADLEQALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-82 | 49 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-83 | 49 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 3e-57 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RC1_1986 | YP_002298193.1 | cystathionine gamma-synthase | BAC0207 | Protein | 3e-69 | 45 |
