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Name : tkt (RC1_1817) Accession : YP_002298025.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1869913 - 1871943 bp Length : 2031 bp Strand : + Note : identified by match to protein family HMM PF04052 match to protein family HMM PF07676 match to protein family HMM TIGR02800 DNA sequence : ATGCACCAGTCCGCTTCCAACGGGTCCGCCAACGGCATCTTCTTCGACGGCATTCCCCATGCCGATCTGGCGAACGCCGT GCGTGCCCTGTCGATGGACGCGGTGGAGGCCGCGAAGTCCGGCCACCCCGGCCTGCCGCTGGGCATGGCGGACGTGGCGA CGGTGCTGTTCACCCGCTTCCTGAAGTTCGACGCGGCCCGGCCGCGCTGGCCCGACCGTGACCGCTTCGTGCTGTCGGCC GGGCACGGCTCGATGCTGCTCTATTCGCTCTTGCACCTGACCGGCCACGAGGACATGCCGCTGGAGGAGCTGAAGCGCTT CCGCCAGCTCGGCAGCCGCACGGCCGGACACCCCGAATTCGGGCTGGCCGCCGGCATCGAGATGACCACCGGACCGCTGG GCCAGGGCATCGCCACGGCCGTCGGCATGGCGCTGGCGGAGCGGGTGCTGAACGCCCGCTTCGGCGACGATCTGGTGGAT CACTACACCTATGTCATCGCCTCCGACGGCGACCTGATGGAGGGGGTGTCGCACGAGGCCGGATCGCTGGCCGGCCATCT GGACCTGTCGCGCCTGATCGTCCTCTGGGACGACAACCGGATCTGCATCGACGGGCCGACGGAGATGTCCTTCACGGACG ACACGCTGGCCCGTTTCCGCGCCTATGGCTGGGACGTGCAGACGATCGACGGACACGACGCGCACCAGATCGCCACGGCC ATCGAGTACGCCCGCACCACCGACGCCCCGTCGCTGATCGCCTGCCGCACCGTCATCGGCTATGGCGCCCCGACCAAGGC CGGCACCGCCGCCAGCCACGGCTCGCCCCTGGGCGCGGCGGAGGTGGAGGGCGTGCGCAAGGCGCTGAACTGGCCGCACG CGCCCTTCGAGGTGCCCGAGCCGGTCCGCCGCGCCTGGCGCACCGCCGGCCGCCGCTGGGCCGAGGCCGCCGATGCCTGG GAGGAGCGGCTGGCGACGGCCGGGCACGAGCTGCGCGAGGCGTTCCGCCAGGCCGTGGACGGCCGCCTGCCGGCCGAGGC CGACGCCATCATCGACCGGATCAAGCGGGAAGCGTCGGAGACGAAGCCCGCCGTCGCCACCCGGCAGGCCTCCGGCACCG TGCTGGACGCGCTGGTTCCGACGGTGCCGGAGCTGCTGGGCGGCTCCGCCGACCTGACCGGCTCGAACAACACCAAGGCG AAGAACGTCCCCATCATCCGCAAGGGCAGCTACGGCGGCCGCTACCTGCATTACGGCGTGCGCGAGCACGGCATGGCCGC CGCCATGAACGGGCTGGCGCTGCATGGCGGGGTGATCCCCTTCGGCGGCACCTTCCTGACCTTCAGCGACTACTGCCGCC CCTCCATCCGCCTGTCGGCGCTGATGAAGCAGCGGGTCGTCTATGTCATGACCCACGACAGCATCGGCCTGGGCGAGGAC GGCCCCACCCACCAGCCGGTGGAGCACATGGCGGCCCTGCGCTGCATCCCCGGCCTTCTGGTCTTCCGTCCGGCGGACGC GGTGGAGACGGCGGAGGTCTGGCAGATCGCGCTGCACCAGAAGGCCCGCCCGTCGGTGCTGGCGCTCACCCGCCAGAACC TGCCCACCCTGCGCACCGTGCACCATGAGGAGAACCTCTCCGCCCGTGGCGCCTATGTGCTGCGCGAGGCGACGGGCGAG CGGCAGGTGACCCTGCTGGCCACGGGGTCGGAGGTCGCCATCGCCGTGGCGGCGCGCGACCTGCTGGAGGCGGACGGGAT CGGCACCGCCGTCGTGTCCATGCCGAGCTGGGAACTGTTCGAGGAACAGCCGGCGGAGTACCGCGCCGGCGTGCTGGGCA GCGGCGTGCGCGTGGCCGTGGAGGCCATGGTGCGCTTCGGCTGGGACCGCTGGACGGGGGCCGCGGACGGCACCCCGGGG GCCTTCGTGGGCATGCCCGGATTCGGGGAGTCCGGCCCCTACCAGGATCTCTACCGTCATTTCGGGATCACGCCGGAGGG GGTCGCGGCCGCGGCCCGGGCACGGCTCTAG Protein sequence : MHQSASNGSANGIFFDGIPHADLANAVRALSMDAVEAAKSGHPGLPLGMADVATVLFTRFLKFDAARPRWPDRDRFVLSA GHGSMLLYSLLHLTGHEDMPLEELKRFRQLGSRTAGHPEFGLAAGIEMTTGPLGQGIATAVGMALAERVLNARFGDDLVD HYTYVIASDGDLMEGVSHEAGSLAGHLDLSRLIVLWDDNRICIDGPTEMSFTDDTLARFRAYGWDVQTIDGHDAHQIATA IEYARTTDAPSLIACRTVIGYGAPTKAGTAASHGSPLGAAEVEGVRKALNWPHAPFEVPEPVRRAWRTAGRRWAEAADAW EERLATAGHELREAFRQAVDGRLPAEADAIIDRIKREASETKPAVATRQASGTVLDALVPTVPELLGGSADLTGSNNTKA KNVPIIRKGSYGGRYLHYGVREHGMAAAMNGLALHGGVIPFGGTFLTFSDYCRPSIRLSALMKQRVVYVMTHDSIGLGED GPTHQPVEHMAALRCIPGLLVFRPADAVETAEVWQIALHQKARPSVLALTRQNLPTLRTVHHEENLSARGAYVLREATGE RQVTLLATGSEVAIAVAARDLLEADGIGTAVVSMPSWELFEEQPAEYRAGVLGSGVRVAVEAMVRFGWDRWTGAADGTPG AFVGMPGFGESGPYQDLYRHFGITPEGVAAAARARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-136 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-133 | 48 |
