Gene Information

Name : fliP (RC1_0181)
Accession : YP_002296443.1
Strain : Rhodospirillum centenum SW
Genome accession: NC_011420
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 171647 - 172450 bp
Length : 804 bp
Strand : -
Note : Gene name synonym flaR.Part of the fliL operon; Type III secrestion system; Export component integral to plasma membrane

DNA sequence :
GTGAAAGCCCGCGCGACGCTGCTGGCGGCCGGCGCCGCCCTGCTGACGACCCTGCTCGCCGCCGCCCCGGCGCTGGCGCA
GAGCTTCAGCATGGACATGGGCGGGACCGGCGACGCCTCGTTCGCGGGGCGCATGGTGCAGGTGGTGGCCCTGGTCACCA
TCCTGTCCGTAGCGCCGGGCCTGCTGGTGATGGTGACGAGCTTCACCCGCATCGTCGTCGTGCTGTCGCTGCTGCGCTCC
GCCCTCGGCCTGCAGCAGACGCCGCCGAACATGGTGCTGCTGGGTCTGGCGCTCCTGCTGACCGCCTATGTCATGGGCCC
CACCCTTGACCGGAGCTGGCGTGAGGGCGTGCAGCCCATGGTGGACGGCCAGATCACCGAGGAGCAGGCGTTCGAGCGCA
TCGTCGAGCCGTTCCGGGACTTCATGCAGGCCCATGTCCGGCCGAAGGATCTGGAGCTGTTCCGCAGCTTCGAGGCGGGA
ACGAAGTCCGGAGCGGCTCCGGCAGCCGGTTCCGCGGGTCCCGCGCCATCCACGGAAGAGGCCGCCAGCGCCCCCGGCCT
GCGCACCCTGATCGCGGCCTTCGTCATCTCCGAGCTGCGGCGCGCCTTCGAGATCGGCTTCCTGCTGTTCCTGCCGTTCC
TGGTGATCGACATGATCATCGCTGCGGTGCTGATGGCCATGGGCATGATGATGCTGCCGCCCGTCATCATCTCGCTGCCG
TTCAAGATCATCTTCTTCGTGATGGTGGACGGCTGGCTGCTGGTCGCCGGTGCCCTGGTGCGCAGCTACGGGGGCGTCGG
ATGA

Protein sequence :
MKARATLLAAGAALLTTLLAAAPALAQSFSMDMGGTGDASFAGRMVQVVALVTILSVAPGLLVMVTSFTRIVVVLSLLRS
ALGLQQTPPNMVLLGLALLLTAYVMGPTLDRSWREGVQPMVDGQITEEQAFERIVEPFRDFMQAHVRPKDLELFRSFEAG
TKSGAAPAAGSAGPAPSTEEAASAPGLRTLIAAFVISELRRAFEIGFLLFLPFLVIDMIIAAVLMAMGMMMLPPVIISLP
FKIIFFVMVDGWLLVAGALVRSYGGVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 5e-21 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 6e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_002296443.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-28 44
fliP YP_002296443.1 flagellar biosynthesis protein FliP VFG2016 Protein 2e-32 44
fliP YP_002296443.1 flagellar biosynthesis protein FliP VFG1259 Protein 7e-33 44
fliP YP_002296443.1 flagellar biosynthesis protein FliP VFG2494 Protein 7e-33 43
fliP YP_002296443.1 flagellar biosynthesis protein FliP VFG0394 Protein 8e-22 42
fliP YP_002296443.1 flagellar biosynthesis protein FliP VFG0044 Protein 4e-18 41
fliP YP_002296443.1 flagellar biosynthesis protein FliP VFG0188 Protein 2e-20 41