Gene Information

Name : RC1_1641 (RC1_1641)
Accession : YP_002297856.1
Strain : Rhodospirillum centenum SW
Genome accession: NC_011420
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1692565 - 1693323 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence :
ATGCCGGCGCGCCCGATCATCCGCTGCTGCGGTCTGGCCAAGGACTACGCGCTCGGCGGCGGTGTCGTGCATGCCCTGCG
CGACGTGACGCTGGAACTGGAGCGGGGTGAGTTCGTCGCCGTCATGGGGCCGTCGGGGTCCGGCAAGTCCACCCTGATGA
ACATGGTCGGCTGCCTGGACACCCCCAGCGCCGGCAGCATCGAGATCGACGGGGAGGATGTCTCCCACCTTTCCGCCGAC
CGGCTGTCGGAGATCCGCTCGCGCCGCATCGGCTTCGTCTTCCAGCAGTTCAACCTGCTGCGCCGCACCTCGGCCCTGGC
CAACGTGATGATGCCGCTGATGTACGCGCCGCTGCCGGTGGCCGACCGTTCCGACCGCGCCCGGCGCTGCCTGGAACTGG
TCGGGCTGGCCAGCCGCATGGACCACCAGCCCTCGCAGCTTTCCGGCGGCCAGCAGCAGCGTGTCGCCATCGCCCGCGCG
CTGGTGAACGATCCCGCCATCCTGCTGGCGGACGAGCCGACCGGGGCGCTCGACAGCCGCACCGGCATGGAGGTGCTGGA
GCTGTTCCAGCGCCTGAACCGCCAGGGCATCACCCTGATGGTGGTGACGCACGATCCGGAGGTGGCGGCGGCGGCCGGGC
GGGTGCTGACTTTCCGCGACGGCCGCATCGTCTCCGACCGCCGCAACGAGCGGCCGCGCGATCTCGCGGCGGAACTCGCC
GCCCTGCCGCCCGCCGAGGAAGAGGAGGCCGCGCCATGA

Protein sequence :
MPARPIIRCCGLAKDYALGGGVVHALRDVTLELERGEFVAVMGPSGSGKSTLMNMVGCLDTPSAGSIEIDGEDVSHLSAD
RLSEIRSRRIGFVFQQFNLLRRTSALANVMMPLMYAPLPVADRSDRARRCLELVGLASRMDHQPSQLSGGQQQRVAIARA
LVNDPAILLADEPTGALDSRTGMEVLELFQRLNRQGITLMVVTHDPEVAAAAGRVLTFRDGRIVSDRRNERPRDLAAELA
ALPPAEEEEAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 8e-25 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RC1_1641 YP_002297856.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-48 55
RC1_1641 YP_002297856.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-53 53
RC1_1641 YP_002297856.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-38 43
RC1_1641 YP_002297856.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-35 41