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Name : tex (RC1_1421) Accession : YP_002297638.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Unknown Product : Tex-like protein, transcription accessory protein (S1 RNA binding domain) Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1462624 - 1465014 bp Length : 2391 bp Strand : + Note : identified by match to protein family HMM PF00196 match to protein family HMM PF04545 DNA sequence : ATGCTCAGCATCGCCCAGCGCATCGCCCAGGAGCTTGCCGTCCGCCCGCAGCAGGTGGAAGCGGCGGTCGCCCTTCTGGA CGAAGGCTCCACGGTTCCCTTCGTCGCCCGCTACCGCAAGGAGGCCACGGGCGGCCTGGACGACACCCAGCTCCGTACCC TTGAGGAGCGGCTGCGCTACCTGCGCGAACTGGAGGAGCGCCGCACCGCGATCCTCCAGTCGATCACCGAGCAGGGCAAA CTGACCCCGGAACTGGAGAAGGAGATCACCGAGGCGGACACCAAGACCCGACTCGAAGACCTCTACCTCCCCTACCGGCC GAAGCGGCGGACCAAGGCCATGATCGCCCGCGAGGCGGGGCTGGAGCCGCTGGCCGACCTGCTGCTGGGCGACCCGTCGC GCCAGCCGGAGGCCGAAGCCGCCGCCTTCGTGGATGCCGAGAAGGGCGTCGCCGACGTGAAGGCCGCGCTGGACGGCGCC CGCGCCATCCTGGTGGAACGCATGGGCGAGAATGCCGAACTGGTCGGCAGCCTGCGCACCTACTGCTACGAGCACGGCCG CGTCGTCTCCAGGGTGGTGGAGGAGAAGCGCGAGGAAGGCGCCAAGTTCAGCGACTATTTCGACTTCGGCGAGGCGCTGA AGCAGGTCCCCTCGCACCGCGCGCTCGCGCTGTTCCGCGGCCGCGCCGCCGGCGTGCTGGACCTGAAGATGGAGGTCGGC GAGGAGCCGCCGCCGGGCACGCCGCATGTCTGCGAGACGATGATCGCCGCCCGCTACGCCATCGCCGACCGCGGCCGCGC GGCCGACCGCTGGCTGCTGGACACCTGCCGCTGGGCCTGGCGCACCAAGATCGCCCTGCACCTGGAGCTGGACCTGATGG GCGTCATCCGCGACCGCGCGGAGGACGAGGCGATCAGCGTCTTCGGCCTGAACCTGAAGGACCTGCTGCTGGCCCCGCCG GCCGGCCAGCGCGCCACGCTGGGCCTTGACCCCGGCATCCGCACCGGCGTCAAGGTCGCCGTGGTGGACGCCACCGGGAA GCTGGTGGAGACGACGACCATCTACCCGCACGAGCCGCGCCGCGACTGGGACGGCTCCATCGCCGTGCTGGCCGCGCTCT GCCTGCGCCACGGGGTCGAGCTGATCGCCATCGGCAACGGCACGGCCAGCCGTGAGACGGACAGGCTGGCCGCCGACATG ATGAAGCGGCACCCTGACCTGAAGGTCACCAAGGTGATGGTGTCGGAGGCCGGCGCCTCGGTCTACTCCGCCTCGGAGAC GGCGGCGCTGGAGTTCCCCGGCCTGGATGTCAGCCTGCGCGGCGCCGTCTCCATCGCCCGCCGGCTCCAGGACCCGCTGG CCGAGCTGGTGAAGATCGACCCGAAGTCGATCGGCGTCGGCCAGTACCAGCACGATGTCAGCCCGGCCAAGCTGGCCCGC ACCCTGGACGCCGTGGTCGAGGACTGCGTGAACGGCGTCGGCGTCGATCTCAACACCGCCTCGGTGCCGCTGCTGGCCCG CGTCTCCGGCCTGTCGGAGAGCGTGGCGAAGAACGTCGTGGAGTTCCGCAACAGCAACGGCGCCTTCCGCCTGCGCCGGC AGCTTCTGGAGGTCTCGCGCCTCGGCCCCAAGGCGTTCGAGCAGGCGGCCGGCTTCCTGCGCATCCGCGACGGCGACAAC CCGCTGGACGGCAGTGCGGTCCACCCGGAAGCCTATCCGGTGGTGGAGCGCATCCTGGCCCGTACCGGCCGCGACCTGAA GCAGATCATCGGCGACGTCGCCTTCCTGCGCTCGCTGGATCCGGCCGACTTCACGGACGAGCGGTTCGGCGTCCCCACCG TCACGGACATCCTGCGCGAGCTGGAGAAGCCGGGCCGTGACCCGCGGCCGGAGTTCAAGACGGCCGCCTTCAAGGACGGC GTGGAAGACCTGAAGGACCTTCAGCCCGGCATGGTGCTGGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGT CGATGTCGGCGTCCACCAGGACGGGCTGGTCCACATCTCCCAGCTCTCCCACACCTTCGTGAAGGACCCGCGCGCCGTGG TGAAGGCGGGCGACATCGTGAAGGTGAAGGTGCTTGAGGTGGACCTGAAGCGCCGCCGCGTCGCCCTCACCATGAAGCTG GACGAGCAGCCCGCCCCGCGCCGGGCCGAGCCGCAGGCGCCGCGGGCCGAACGGCAGCCGGGCGCCTCCCGCCGGCCGGA CGCGCCGCGCTCCGCGGACAACCGGCCCCGCCCCGCCGCGGCGCGGGAGGAGCGTCCCGCCAAGGCAGCCAAGGCGCCGG CGGCGCAGCCGCAGGTGGGCGCTCTGGGGGCCGCACTGGCCGAGGCGATGGCGCGCGCGAAGAAGGGCTGA Protein sequence : MLSIAQRIAQELAVRPQQVEAAVALLDEGSTVPFVARYRKEATGGLDDTQLRTLEERLRYLRELEERRTAILQSITEQGK LTPELEKEITEADTKTRLEDLYLPYRPKRRTKAMIAREAGLEPLADLLLGDPSRQPEAEAAAFVDAEKGVADVKAALDGA RAILVERMGENAELVGSLRTYCYEHGRVVSRVVEEKREEGAKFSDYFDFGEALKQVPSHRALALFRGRAAGVLDLKMEVG EEPPPGTPHVCETMIAARYAIADRGRAADRWLLDTCRWAWRTKIALHLELDLMGVIRDRAEDEAISVFGLNLKDLLLAPP AGQRATLGLDPGIRTGVKVAVVDATGKLVETTTIYPHEPRRDWDGSIAVLAALCLRHGVELIAIGNGTASRETDRLAADM MKRHPDLKVTKVMVSEAGASVYSASETAALEFPGLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSPAKLAR TLDAVVEDCVNGVGVDLNTASVPLLARVSGLSESVAKNVVEFRNSNGAFRLRRQLLEVSRLGPKAFEQAAGFLRIRDGDN PLDGSAVHPEAYPVVERILARTGRDLKQIIGDVAFLRSLDPADFTDERFGVPTVTDILRELEKPGRDPRPEFKTAAFKDG VEDLKDLQPGMVLEGVVTNVTNFGAFVDVGVHQDGLVHISQLSHTFVKDPRAVVKAGDIVKVKVLEVDLKRRRVALTMKL DEQPAPRRAEPQAPRAERQPGASRRPDAPRSADNRPRPAAAREERPAKAAKAPAAQPQVGALGAALAEAMARAKKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
