|
Name : ribD (RC1_1340) Accession : YP_002297557.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG1985 EC number : 1.1.1.193 Position : 1382759 - 1383898 bp Length : 1140 bp Strand : - Note : [includes] Diaminohydroxyphosphoribosylaminopyrimidi ne deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase identified by match to protein family HMM PF00376 DNA sequence : ATGACCGCTTCGCCCTCCGTGGCTGCGGGCCGGTTCTCCGACCAGGACCGCGCCCACATGCGGGCCGCCCTTACCCTTGC GGCCCGGGGCCTGGGCCGTGTCTGGCCGAACCCCTCCGTCGGCTGCGTGCTGGTCCGCGAGGGCCGCGTCGTCGGCCGTG GCGTCACCGGGGCCGGCGGCCGACCGCACGGTGAGACGGAAGCCCTGCGCCAGGCCGGGGAGCAGGCCCGCGGCGCCACC GCCTATGTCAGTCTGGAACCCTGCAACCATCACGGCAGGACACCGCCCTGCACCGAGGCGCTGATGGCGGCGGGCGTCGC CCGCGTCGTCGTCGCCTGCGAGGATCCGGACCCCCGCGTGTCCGGCGGCGGGCTGGCGCGGCTGCGGGCGGCCGGTCTGG AGGTCGCGTCCGGGCTGCTGGAGGCCGAGGCGCAGGAGCTTAACGCCGGTTTCTTCCTGCGCATCCGCGAGGGCCGGCCG CTGGTGACGCTGAAGCTCGCCACTTCGCTGGACGGCCGCATCGCCACCCGCACGGGGGAGAGCCGCTGGATCACCGGCCC GGTGGCGCGGGCCTGGGGGCACGGGCTGCGCGCCAGCCACGACGCCATCCTGGTCGGCATCGGCACGGCGCTGGCGGACG ATCCGGAGCTGACCTGCCGGCTGCCGGGGATGGCGGATCGCTCGCCCGTCCGCATCGTGCTGGACAGCCGGCTGCGGCTG CCGCTCACCAGCAGGCTGGTGCGGACGGCCGACCGCACGCCGGTCTGGCTCATCACGCGGCCGGACGCGGCGGAGCCCGC GCGGATGGCGGCCTTCGCCGACTGCGGCGTGGACCTGATCCCGGTCGAACCCGGTCCGGGGGGGGAGATTCCCCTGCCGC AGGCCCTGCGCACCCTGGCCGCCCGCGGTATCACCCGTGTGCTGGCGGAAGGCGGGGCGCGCCTGGCGGCGTCGCTGCTG CGCGACGGTCTGGCCGACCGGCTGGAATGGTTCCGTGCCGGCCTGCTGCTGGGCGGCGACGCGCTGCCGGCCGCCGTCGG CTTCGGCGCGGACCGGCTGGCCGACGCGCCCCGCTACGAGCGCATCGCCGTCCGGCCCGCCGGTGAGGACCTGCTGGAGA GCTATCGCCGCCGCGGCTGA Protein sequence : MTASPSVAAGRFSDQDRAHMRAALTLAARGLGRVWPNPSVGCVLVREGRVVGRGVTGAGGRPHGETEALRQAGEQARGAT AYVSLEPCNHHGRTPPCTEALMAAGVARVVVACEDPDPRVSGGGLARLRAAGLEVASGLLEAEAQELNAGFFLRIREGRP LVTLKLATSLDGRIATRTGESRWITGPVARAWGHGLRASHDAILVGIGTALADDPELTCRLPGMADRSPVRIVLDSRLRL PLTSRLVRTADRTPVWLITRPDAAEPARMAAFADCGVDLIPVEPGPGGEIPLPQALRTLAARGITRVLAEGGARLAASLL RDGLADRLEWFRAGLLLGGDALPAAVGFGADRLADAPRYERIAVRPAGEDLLESYRRRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-30 | 44 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-30 | 44 |
