Gene Information

Name : cueR (RC1_0141)
Accession : YP_002296403.1
Strain : Rhodospirillum centenum SW
Genome accession: NC_011420
Putative virulence/resistance : Resistance
Product : HTH-type transcriptional regulator cueR
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 130346 - 130780 bp
Length : 435 bp
Strand : -
Note : Alternate namesMatched to PF00376: transcriptional regulator, MerR family; identified by match to protein family HMM PF00551 match to protein family HMM PF01842 match to protein family HMM TIGR00655

DNA sequence :
ATGAACATCGGCCGTCTGGGCAGCCTCACGGAGACGAATGTCGAGACGATCCGCTACTACGAGCGGATCGGGCTCTTGCC
GCCGCCGCCGCGGACGCAGAGCAACTACCGTGACTATGACGACGGGCATGTGCGGCGGCTGTCCTTCATCCGGCGGGCAC
GCGCCCTCGGCTTCCATCTGGACACGATCCGGGCGCTGCTGGACGTGTCGGACCGGCCGGACCAGTCCTGCGCCGGCGTG
GACGCGCTGACCCGCCGGCAGATCGCCGAGGTGGAGGCGAAAATCGCCGACCTGACCCGGCTACGCGACGAGCTGGTCCG
TCTCGCCGGCCAGTGCCGCGGCGACCGGATCAGGGACTGCCGCATCATCGAAGCCCTGTCGCCGCCGGTCCTACCGGAAC
CCCTGCCAGAAATGCCCGCCCAGGGCCGGCCGTGA

Protein sequence :
MNIGRLGSLTETNVETIRYYERIGLLPPPPRTQSNYRDYDDGHVRRLSFIRRARALGFHLDTIRALLDVSDRPDQSCAGV
DALTRRQIAEVEAKIADLTRLRDELVRLAGQCRGDRIRDCRIIEALSPPVLPEPLPEMPAQGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 5e-22 48
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 5e-21 46
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-21 46
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 3e-21 46
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-21 46
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 4e-21 46
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 4e-21 46
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 4e-21 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cueR YP_002296403.1 HTH-type transcriptional regulator cueR BAC0058 Protein 1e-25 51
cueR YP_002296403.1 HTH-type transcriptional regulator cueR BAC0682 Protein 7e-19 45
cueR YP_002296403.1 HTH-type transcriptional regulator cueR BAC0190 Protein 6e-19 42