Gene Information

Name : ECSE_P3-0042 (ECSE_P3-0042)
Accession : YP_002295996.1
Strain :
Genome accession: NC_011416
Putative virulence/resistance : Unknown
Product : truncated transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 37851 - 38864 bp
Length : 1014 bp
Strand : +
Note : -

DNA sequence :
ATGGGAATCCCCCTCCTGAGTCACGAAGTGCGAAGGTGGGGGAGGATGTCAATGTATCGTCAGAGTGAAATCTATGCCCG
CCAGGGCGTCGAACTGAGCCGTGCATTACTCTCCAACTGGGTTGACGCGTGCTGCCAGTTAATGACGCCACTGAATGATG
CCCTGTACCGTTACGTGATGAATACCTTCAAGCTTCACACTGACGACACACCGGTAAAGGTACTGGCACCGGGCAGGAAG
AAGGCGAAAACAGGATATATCTGGACGTATGTCCGGGATGACAGGAATGCCGGTTCGCCAGAGCCTCCAGCGGTCTGGTT
CGCCTACTCACCGGATCATCAGGGTAAACATCCGGAGCAGCACCTTCGTCCCTTCCGGGGTATCCTACAGGCAGATGCGT
TTAATGGTTACGATCGGCTGTTCAGTGCCGAACGTGAAGGCGGCGCGTTGACGGAAGCAGGATGCTGGGCTCATGCGCGA
CGCAAAATCCACGATGTATATATCAGTACTAAAAGCGCGACGGCGGAAGAAGCACTGAAACTAATCGGTGAACTGTACGC
CATCGAGCACGATATACGCGGGTTACCGGTGTCTGAACGCCTGGCGGTCAGGCAAATGCAGAGTAGACCGCTCCTGACTT
CCATGTATAAGCTGATGCAGGAGAAAGAACACACGTTATCGAAGAAATGTCGTCTGGGAGATGCGTTCCGGTATATCAGG
AAGCACTGGGCTGCGTTGTGCAACTTCTGTGATGATGGCCTGGCTGAGGTAGATAATAATGCTGCAGAAAGAGCGCTTCG
TGCAGTCTGTCTCGGGAAGAAAAATTATGTGTTCTTCGGCAGCGATCACGGTGGCGAGCGTGGAGCACTGTTGTACGGGC
TGATCGGCACCTGCCGACTGAACGGTATAGATCCGGAAGCGTATCTGCGCCATATCCTGAGTGTACTGCCAGAATGGCCT
TCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGCACTCACCAATAAATAA

Protein sequence :
MGIPLLSHEVRRWGRMSMYRQSEIYARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNTFKLHTDDTPVKVLAPGRK
KAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFNGYDRLFSAEREGGALTEAGCWAHAR
RKIHDVYISTKSATAEEALKLIGELYAIEHDIRGLPVSERLAVRQMQSRPLLTSMYKLMQEKEHTLSKKCRLGDAFRYIR
KHWAALCNFCDDGLAEVDNNAAERALRAVCLGKKNYVFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWP
SNRVDELLPWNVALTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-98 63
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 2e-82 56
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 1e-79 55
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 9e-56 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_P3-0042 YP_002295996.1 truncated transposase VFG1700 Protein 7e-99 63
ECSE_P3-0042 YP_002295996.1 truncated transposase VFG0634 Protein 4e-80 55
ECSE_P3-0042 YP_002295996.1 truncated transposase VFG1513 Protein 5e-56 50