Gene Information

Name : ECSE_P3-0039 (ECSE_P3-0039)
Accession : YP_002295993.1
Strain :
Genome accession: NC_011416
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 36077 - 36976 bp
Length : 900 bp
Strand : -
Note : -

DNA sequence :
GTGGAAAAAATAGCGCCTCTGGTGGATACCCTGCGTGGTACGCACGGGGTCGGACCGGTATGCCACGAGCTGGCTGTCGC
CCCGTCAACGTATTACCGGCATCGTGCGCATCAACGGCATCCGGATAAACGCAGTCAGCGGGCACAGCGTGATGACCTGC
TGAAGCCGGAGATACAGCGCGTGTACGATGTAAACCACAGCGTGTACGGTGTGCGCAAGGTCTGGCGCCAGTTGTTGCGT
GAGAGGGTGACCGTAGCCAGGTGCACAGTAGAACGGCTGATGAAGGTGATGGGGCTTGCCGGTGTGCGCCGGGGTAAAAA
GGTCCGCACCACAGTCAGCCGGAAAGAAGCCGCTGCGGGTGACCGGGTGAACCGCCAGTTCGTGGCAGAATGCCCCAACC
AGCTGTGGGTGGCTGACTTCACGTATGTGAGCACCTGGCAGGGCTTCGCTTACGTGGCGTTCATCATCGATGTGTTCGCC
GGCGTCATTGTGGGCTGGCGGGTCTCATCGTCGATGAAAACGACGTTCGTGCTGGATGCACTGGAGCAGGCGCTGTGGGC
CCGTCGCCCGTCGGGCACCATCCATCACTCAGATAAGGGGTCACAATATGTGTCGCTGGCATACACTCAGCGGCTTAAGG
ATGCAGAGTTGCTGGCGTCAACCGGCAGCACAGGCGACTCATATGACAACGCGATGGCGGAGAGCATCAACGGACTTTAT
AAAGCGGAGGTGATACATCGTAAGAGCTGGAAAAACCGCGCCGAAGTGGAACTGGCCACACTGACGTGGGTGGACTGGTA
CAATAACCGACGGTTGCTGGGACAACTGGGTCATATCCCGCCGGCAGAAGCGGAAAAGGCATATTACGCTTCCATCGGAA
ATGGTGATCTGGCAGCCTGA

Protein sequence :
MEKIAPLVDTLRGTHGVGPVCHELAVAPSTYYRHRAHQRHPDKRSQRAQRDDLLKPEIQRVYDVNHSVYGVRKVWRQLLR
ERVTVARCTVERLMKVMGLAGVRRGKKVRTTVSRKEAAAGDRVNRQFVAECPNQLWVADFTYVSTWQGFAYVAFIIDVFA
GVIVGWRVSSSMKTTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTQRLKDAELLASTGSTGDSYDNAMAESINGLY
KAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGQLGHIPPAEAEKAYYASIGNGDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 3e-88 92
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 1e-87 91
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 7e-100 90
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 5e-116 86
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-116 86
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 5e-116 86
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-113 86
Z1198 NP_286733.1 transposase Not tested TAI Protein 6e-115 86
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-115 86
Z1638 NP_287141.1 transposase Not tested TAI Protein 6e-115 86
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 3e-115 86
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-112 86
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-115 86
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 7e-113 86
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-115 86
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 7e-113 86
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-115 86
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 7e-113 86
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-115 85
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 7e-112 84
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-81 81
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_P3-0039 YP_002295993.1 transposase VFG1602 Protein 4e-112 84