Gene Information

Name : ECSE_P3-0016 (ECSE_P3-0016)
Accession : YP_002295970.1
Strain :
Genome accession: NC_011416
Putative virulence/resistance : Unknown
Product : truncated transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 13059 - 14420 bp
Length : 1362 bp
Strand : +
Note : -

DNA sequence :
ATGGACACCTCACTTGCTCATGAGAACGCCCGCCTGCGGGCACTGTTGCAGACGCAACAGGACACCATACGCCAGATGGC
TGAATACAACCGCCTGCTCTCACAGCGGGTGGCGGCTTATGCTTCCGAAATCTACCGGCTGAAGGCGCTGGTTGCGAAAC
TGCAACGTATGCAGTTCGGTAAAAGCTCAGAAAAACTTCGTGCAAAAACCGAACGGCAGATACAGGAAGCACAGGAGCGA
ATCAGCGCACTTCAGGAAGAAATGGCGGAAACGCTGGGTGAGCAATATGACCCGGTACTGCCATCCGCCCTGCGCCAGTC
TTCAGCCCGTAAACCGTTACCGGCCTCATTTCCCCGTGAAACCCGGGTTATCCGGCCGGAAGAGGAATGCTGTCCTGCCT
GTGGTGGTGAACTCAGTTCTCTGGGATGTGATGTGTCAGAGCAACTGGAGCTTATCAGCAGCGCCTTTAAGGTTATCGAA
ACACAACGTCCGAAACTGGCCTGTTGCCGGTGCGACCATATCGTGCAGGCACCAGTACCTTCAAAACCCATTGCACGCAG
TTATGCCGGAGCGGGGCTCCTGGCCCATGTCGTCACCGGAAAATATGCAGACCATCTGCCGTTATACCGCCAGTCAGAGA
TATACCGCCGTCAGGGTGTGGAGCTGAGCCGTGCCACACTGGGGCGCTGGACAGGTGCCGTTGCTGAACTGCTGGAGCCG
CTGTATGACGTCCTGCGCCAGTATGTGCTGATGCCCGGTAAAGTCCATGCTGATGATATCCCCGTCCCGGTCCAGGAGCC
GGGCAGCGGTAAAACCCGGACAGCCCGGCTGTGGGTCTACGTCCGTGATGACCGTAACGCCGGTTCACAGATGCCCCCGG
CGGTCTGGTTCGCGTACAGTCCGGACCGGAAAGGTATCCATCCACAAAATCACCTGGCCGGTTACAGCGGTGTGCTTCAG
GCCGATGCTTACGGTGGTTACCGGGCGTTATACGAATCCGGCAGAATAACGGAAGCCGCGTGTATGGCTCATGCCCGGAG
AAAAATCCACGATGTGCATGCAAGAGCGCCCACCGACATCACCACGGAAGCCCTGCAGCGTATCGGTGAACTGTATGCCA
TCGAGGCAGAGGTCCGGGGCTGTTCAGCAGAACAGCGTCTGGCGGCAAGAAAAACCAGAGCCGCGCCACTGATGCAGTCA
CTGTATGACTGGATACAGCAACAGATGAAAACACTGTCGCGTCACTCAGATACGGCAAAAGCGTTCGCATACCTGCTGAA
ACAGTGGGATGCACTGAACGTGTACTGCAGTAATGGCTGGGTGGAAATCGACAACAACATCGCAGAGAAGGAGTGGCCGT
AG

Protein sequence :
MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEIYRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQER
ISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASFPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIE
TQRPKLACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEP
LYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQ
ADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTDITTEALQRIGELYAIEAEVRGCSAEQRLAARKTRAAPLMQS
LYDWIQQQMKTLSRHSDTAKAFAYLLKQWDALNVYCSNGWVEIDNNIAEKEWP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 0.0 99
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 4e-146 96
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 9e-139 65
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 6e-139 65
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 9e-107 61
tnp AEA34686.1 transposase Not tested Not named Protein 2e-111 60
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 3e-110 59
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-110 59
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 3e-110 59
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-110 59
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-110 59
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-109 59
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-109 59
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 3e-110 59
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 8e-110 59
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-110 59
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 2e-83 58
unnamed AAL08460.1 unknown Not tested SRL Protein 8e-96 58
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 3e-91 54
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 8e-91 53
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 8e-91 53
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-101 51
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-74 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_P3-0016 YP_002295970.1 truncated transposase VFG1513 Protein 2e-146 96
ECSE_P3-0016 YP_002295970.1 truncated transposase VFG0793 Protein 1e-110 59
ECSE_P3-0016 YP_002295970.1 truncated transposase VFG1516 Protein 1e-83 58
ECSE_P3-0016 YP_002295970.1 truncated transposase VFG1051 Protein 5e-96 58
ECSE_P3-0016 YP_002295970.1 truncated transposase VFG1736 Protein 8e-91 54