Gene Information

Name : ECSE_4560 (ECSE_4560)
Accession : YP_002295835.1
Strain : Escherichia coli SE11
Genome accession: NC_011415
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase subunit I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 4756754 - 4757767 bp
Length : 1014 bp
Strand : -
Note : catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in th

DNA sequence :
ATGTCCAGGTTTTATCATAAGCATTTCCTGAAATTACTCGATTTCACGCCAGCTGAACTCAACAGCCTGCTGCAGTTAGC
CGCGAAACTGAAAGCCGATAAGAAAAGCGGCAAAGAAGAAGCCAAACTCACTGGTAAAAACATCGCGCTCATCTTCGAAA
AAGACTCGACCCGTACCCGATGCTCTTTCGAAGTTGCCGCATATGACCAGGGTGCTCGCGTTACTTATCTCGGCCCAAGC
GGCAGTCAGATTGGTCATAAAGAGTCGATTAAAGACACTGCCCGCGTGCTGGGTCGCATGTATGACGGTATTCAGTATCG
CGGCTATGGTCAGGAGATTGTCGAAACACTGGCGGAATACGCTGGCGTGCCGGTATGGAACGGCCTGACCAATGAGTTTC
ACCCCACGCAGTTGCTGGCGGATCTCCTCACCATGCAGGAGCATTTACCCGGTAAAGCATTCAACGAAATGACGCTGGTC
TATGCAGGTGACGCACGTAACAACATGGGCAATTCGATGCTCGAAGCTGCGGCGCTTACCGGTCTGGATTTGCGTCTGGT
CGCGCCACAGGCATGCTGGCCGGAAGCTGCGCTGGTTACGGAATGCCGCGCCCTGGCACAGCAAAATGGCGGGAATATTA
CGCTGACGGAAGATGTAGCCAAAGGAGTTGAAGGTGCTGACTTTATCTATACCGATGTATGGGTGTCGATGGGGGAAGCA
AAAGAGAAATGGGCAGAACGGATTGCATTACTGCGTGATTATCAGGTGAACAGCAAGATGATGCAGTTGACCGGTAACCC
GGAGGTCAAATTCCTCCATTGCCTGCCCGCGTTTCATGACGACCAGACGACGCTTGGTAAGAAAATGGCGGAAGAGTTTG
GCCTACATGGCGGAATGGAAGTGACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGC
ATGCATACCATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATTAAATAATTAA

Protein sequence :
MSRFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPS
GSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEA
KEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENR
MHTIKAVMVATLSKLNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-90 59
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-90 59
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-90 59
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-90 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-90 59
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 4e-90 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-90 59