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Name : ECSE_3246 (ECSE_3246) Accession : YP_002294521.1 Strain : Escherichia coli SE11 Genome accession: NC_011415 Putative virulence/resistance : Virulence Product : putative type II secretion protein GspC Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3031 EC number : - Position : 3371284 - 3372114 bp Length : 831 bp Strand : - Note : part of the general (type II) secretion pathway (GSP), a signal sequence-dependent process responsible for protein export; involved in trans-location of exoproteins from the cytoplasm to the periplasm DNA sequence : ATGTTCTGGCTGATGCTGCTTATTATTTCTGCAAAAGTGGCGCATTCACTCTGGCGCTATTTCTCCTTTTCTGCGGAATA TACGGCTGTTTCCCCATCGGCGAATAAACCGCCCCGTGCGGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCA GCCAGCAAAACTGGTTTGGCAAATATCAGCCCGTCGCCACGCCGGTAAAACAACCCGAACCTGTGCCTGTGGCAGAAACG CGTCTTAATGTGGTGCTGCGCGGGATTGCCTTTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGCGGTAAACAGCAGGT CTATTTGCAGGGTGAAACGCTTGGCTCGCACAATGCGGTGATTGAGGAAATCAATCGCGACCATGTGATGCTGCGCTATC AGGGAAAAATAGAGCGCCTGAGCCTGGCTGAAGAGGAGCGTTCCACCGTTGCCGCGACCAACAAAAAAGCTGTCAGTGAC GAAGCAAAGCAAGCTGTTGCTGAACCTGCTGTCAGTGCGCCAGTTGAGATACCGACTGCCGTGCGTCAGGCACTGGCGAA AGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGAATTGTCGGTTATGCAGTGAAGCCGG GGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACT GATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGC GCGCCACGACATTTCCATCGCGCTGCGCTAA Protein sequence : MFWLMLLIISAKVAHSLWRYFSFSAEYTAVSPSANKPPRADAKTFDKNDVQLISQQNWFGKYQPVATPVKQPEPVPVAET RLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAATNKKAVSD EAKQAVAEPAVSAPVEIPTAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAVKPGADRSLFDASGFKEGDIAIALNQQDFT DPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspC | CAE85235.1 | GspC, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-119 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECSE_3246 | YP_002294521.1 | putative type II secretion protein GspC | VFG2046 | Protein | 1e-117 | 95 |
