Gene Information

Name : ECSE_3242 (ECSE_3242)
Accession : YP_002294517.1
Strain : Escherichia coli SE11
Genome accession: NC_011415
Putative virulence/resistance : Virulence
Product : putative type II secretion protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3366006 - 3366461 bp
Length : 456 bp
Strand : -
Note : -

DNA sequence : 
ATGTATTCGTTATCCCGCACACAAAAACCACGGGCAGGTTTTACCCTGCTGGAAGTGATGGTGGTGATTGTTATTCTTGG
CGTCCTGGCAAGTCTGGTGGTGCCTAACCTGTTGGGCAATAAAGAGAAAGCGGATCGGCAAAAAGCCATCAGCGATATCG
TGGCGCTGGAGAATGCGCTGGATATGTACCGACTGGATAACGGGCGTTATCCGACCACAGAACAGGGGCTTGAGGCGCTG
ATCCAGCAGCCAGCCAATATGGCGGACTCCCGCAACTACCGTACTGGTGGATACATCAAACGACTGCCAAAGGATCCGTG
GGGCAATGATTATCAGTATCTCAGCCCGGGTGAAAAAGGACTGTTTGATGTTTATACCCTAGGGGCGGATGGTCAGGAAA
ACGGGGAAGGCGCTGGCGCAGATATCGGTAACTGGAATTTGCAGGAGTTTCAGTAA

Protein sequence : 
MYSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPTTEQGLEAL
IQQPANMADSRNYRTGGYIKRLPKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 7e-65 99
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-65 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_3242 YP_002294517.1 putative type II secretion protein VFG2050 Protein 2e-65 99
ECSE_3242 YP_002294517.1 putative type II secretion protein VFG0180 Protein 3e-37 55
ECSE_3242 YP_002294517.1 putative type II secretion protein VFG1871 Protein 1e-33 53