Gene Information

Name : ECSE_3241 (ECSE_3241)
Accession : YP_002294516.1
Strain : Escherichia coli SE11
Genome accession: NC_011415
Putative virulence/resistance : Virulence
Product : putative type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3365439 - 3365969 bp
Length : 531 bp
Strand : -
Note : -

DNA sequence : 
ATGTTGGTGATTTTCCTTATCGGCCTTGCCAGTTCGGGCGTGGTACAGACGTTTGCGACCGATTCTGAACCGCCCGCGAA
AAAAGCGGCACAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACAGGGCAGTGATTGAAGGGCAGACACTCGGTGTGC
TAATCGACGCGCCTGGCTATCAGTTTATGCAGCGTCGTCAGGGGCAGTGGTTGCCCGTTTCCGCGACCCGGTTATCGGCA
CAGGTTACGGTGCCAAAACAGGTGCAGATGCTGTTACAACCCGGAAGTGATATCTGGCAGAAGGAGTATGCGCTGGAGCT
GCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAAAAGAGGCGAAAAAGAAGACGCCGCAGATCCGTT
TTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCGGCGGCGCAAAACGCATGTTGGGCGGTAAAGCTG
GCACACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCCATGA

Protein sequence : 
MLVIFLIGLASSGVVQTFATDSEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDAPGYQFMQRRQGQWLPVSATRLSA
QVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNACWAVKL
AHDGALSLNQCDERMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspH CAE85230.1 GspH, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-79 99
gspH YP_854403.1 type II secretion protein GspH Not tested PAI I APEC-O1 Protein 6e-79 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_3241 YP_002294516.1 putative type II secretion protein VFG2051 Protein 3e-78 96