Gene Information

Name : ECSE_3240 (ECSE_3240)
Accession : YP_002294515.1
Strain : Escherichia coli SE11
Genome accession: NC_011415
Putative virulence/resistance : Virulence
Product : putative type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3365071 - 3365442 bp
Length : 372 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCGCGGATTTACCTTGCTGGAAGTGATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT
TGCCAGCGGTGCGCTGAGTAATCAGCAAATTCTTGAGGAAAAAACGGTAGCGGGCTGGGTAGCTGAAAACCAGACTGCGC
TGCTCTACCTGATGACCCGTGAGCAGCGGGCGGTCAGGCATCAGGGCGAGAGCGATATGGCAGGAAGCCGCTGGTACTGG
CGAACAATCCCATTGAATACAGGCAACGCGCTGCTCCAGGCGGTGGATATTGAAGTCAGCCTTCACGAAGACTTTTCGTC
GGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence :
MKRGFTLLEVMLALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTIPLNTGNALLQAVDIEVSLHEDFSSVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-42 99
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 6e-42 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_3240 YP_002294515.1 putative type II secretion protein VFG2052 Protein 6e-42 95