Gene Information

Name : gutQ (ECSE_2956)
Accession : YP_002294231.1
Strain : Escherichia coli SE11
Genome accession: NC_011415
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 3064284 - 3065210 bp
Length : 927 bp
Strand : +
Note : catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate

DNA sequence :
ATGCTGGAGTTGCAGGAAGCAAGCCGTTTACCGGAACGTCTGGGCGATGATTTTGTTCGCGCCGCCAATATCATCCTGCA
CTGCGAAGGCAAAGTGGTGGTTTCGGGAATTGGCAAATCGGGCCACATTGGTAAGAAAATCGCCGCAACACTTGCCAGTA
CCGGCACACCGGCTTTTTTTGTCCATCCGGCAGAAGCACTGCACGGCGATCTGGGGATGATTGAAAGCCGCGATGTGATG
CTGTTTATCTCTTACTCCGGTGGCGCGAAGGAACTGGATCTGATTATTCCGCGTCTGGAAGATAAATCTATCGCGCTGCT
GGCGATGACCGGCAAACCGACGTCACCGCTGGGCCTGGCGGCAAAAGCGGTGCTGGATATCTCCGTAGAACGCGAAGCCT
GCCCGATGCACCTTGCGCCGACCTCCAGCACCGTCAATACCCTGATGATGGGTGACGCGCTGGCGATGGCGGTCATGCAG
GCGCGCGGTTTTAATGAAGAAGATTTTGCCCGCTCCCACCCAGCTGGGGCACTGGGCGCTCGCTTGCTGAATAAAGTGCA
TCATCTGATGCGCCGTGATGACGCTATCCCGCAGGTAGCGTTAGCCGCCAGCGTGATGGATGCGATGCTGGAGCTCAGCC
GCACCGGTCTGGGGCTGGTGGCGGTATGTGACGCTCAACAACAGGTACAAGGCGTCTTTACCGACGGCGATTTACGTCGC
TGGCTGGTTGGCGGCGGCGCACTCACCACGCCAGTTAATGAAGCGATGACGACAGGCGGCACCACATTACAGGCGCAAAG
CCGTGCCATCGACGCCAAAGAGATCCTGATGAAGCGCAAAATCACTGCCGCACCGGTGGTAGATGAAAACGGCAAACTCA
CCGGCGCAATTAACTTGCAGGATTTCTATCAGGCCGGGATTATTTAA

Protein sequence :
MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVM
LFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQ
ARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALAASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR
WLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 4e-42 42
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 8e-42 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 1e-41 42