Gene Information

Name : ECSE_0289 (ECSE_0289)
Accession : YP_002291564.1
Strain : Escherichia coli SE11
Genome accession: NC_011415
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 321721 - 322596 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence :
ATGAATAAACCTGACGGCCTTCAGGCCCTTGAACAACCGCTCGCGTCGCTTCCGCACACGCTTCGCCAGCTTATTCTTGA
ACGTATCCAGAACCTGACCCATTACGAGCCGGTAATTGGCATCATGGGCAAAAGTGGTACAGGTAAATCCTCTCTTTGCA
ACGAACTTTTCCGGGGTGAGGTGTCCCGGGTGAGTGATGTGAACGCCTGTACTCGCGACGTACTGCGCTTCCGGTTGCGC
AGCGGTCGTCACAGTCTGGTGATTGTCGATTTACCGGGGGTTGGTGAAAACGGGCGGCGGGATCAAGAATACCGTGCCCT
GTACCGTCGAATCCTGCCGGAACTGGATCTGGTGTTGTGGGTCATTAAGGCCGATGATCGGGCACTAACCGTGGACGAGC
AGTCCTGGCACGGTGTGATGCAACCTTACAGGCAAAAGGTACTGTTTGTGATTAACCAGGCCGACAAAATCGAACCCTGT
CATGAATGGGATACCCTCACCAGCAAACCTTCAACACACCAACAGGGAAATCTTAAAGCGAAGCAGGCTGCGATTATGGC
GATGTTTAAACCGCATCATCCGGTCTGTGCGGTGTCCGCCAGCACTGGATGGGGCATTGAGGATATGGTGGCAACCATGA
TGCGCTGTCTGCCTGACCGCGCCACCAGTCCGGTGGTGACACAACTGCACGGGAGACTCTGCACAGAGCCGGTAAAGTCG
CAGGCCCGTGACAGTTTCGGTGACGCTGTGGGTTGTGTTTTCGATACGGCTGAGTCATCGTCATTCCTGCCTGCGCCACT
GAAAACGGTGATTCGAACCGTGCGGGAAGCCGTGGTAACCGTTGCCCGTGCCGTCTGGGACTGGATTTTCTTATGA

Protein sequence :
MNKPDGLQALEQPLASLPHTLRQLILERIQNLTHYEPVIGIMGKSGTGKSSLCNELFRGEVSRVSDVNACTRDVLRFRLR
SGRHSLVIVDLPGVGENGRRDQEYRALYRRILPELDLVLWVIKADDRALTVDEQSWHGVMQPYRQKVLFVINQADKIEPC
HEWDTLTSKPSTHQQGNLKAKQAAIMAMFKPHHPVCAVSASTGWGIEDMVATMMRCLPDRATSPVVTQLHGRLCTEPVKS
QARDSFGDAVGCVFDTAESSSFLPAPLKTVIRTVREAVVTVARAVWDWIFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99256.1 unknown Not tested LEE Protein 3e-73 59
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 2e-73 59
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 3e-73 59
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 3e-73 59
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 3e-73 58
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 5e-73 58
Z1210 NP_286745.1 histone Not tested TAI Protein 2e-73 58
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 2e-73 58
unnamed AAL08471.1 unknown Not tested SRL Protein 1e-73 58
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 8e-74 58
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 5e-73 58
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-71 58
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-73 58
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 2e-48 42
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-48 42
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-48 42
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-48 42
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-48 42
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 7e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_0289 YP_002291564.1 hypothetical protein VFG0654 Protein 2e-73 58
ECSE_0289 YP_002291564.1 hypothetical protein VFG1674 Protein 5e-74 58
ECSE_0289 YP_002291564.1 hypothetical protein VFG1062 Protein 8e-74 58
ECSE_0289 YP_002291564.1 hypothetical protein VFG1522 Protein 1e-48 42
ECSE_0289 YP_002291564.1 hypothetical protein VFG1612 Protein 4e-49 42