Gene Information

Name : ECSE_P2-0053 (ECSE_P2-0053)
Accession : YP_002291202.1
Strain :
Genome accession: NC_011413
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 39151 - 39603 bp
Length : 453 bp
Strand : -
Note : -

DNA sequence :
ATGCATAAGATTATCGCCATTATCCTCATAATGTTTGCAGGAAATACATATTCCTCTGACTGTTTTGAACTTGCTGGCAG
AGATTACAAAATAGATCCCGATTTACTGAGAGCGATTTCATGGCATGAATCCCGTAACAGGGTTAATGCTATCGGCATTA
ATCCTGTTACGGGATATGGCTCCGGCCTGATGCAAATCGACTCCCAGCATTTTAAGGAGTTGTCACGTTACGGAATAAAA
CCAGAACACCTGGTTACAGATCCGTGCATGAATATTTATACCGGTGCGTATTACCTGGCAATAGCGTTCAAAAAGTGGGG
CGTAACGTGGCGGGCTGTCGGTGCTTACAATGCCGGTTTTCGCAACACAGAGGAACAGGAACGACGCAGAAAAATTTATG
CCACAAAAATACAGAACATTTATCGCAATATAAAGAACAAACGAGGGTACTGA

Protein sequence :
MHKIIAIILIMFAGNTYSSDCFELAGRDYKIDPDLLRAISWHESRNRVNAIGINPVTGYGSGLMQIDSQHFKELSRYGIK
PEHLVTDPCMNIYTGAYYLAIAFKKWGVTWRAVGAYNAGFRNTEEQERRRKIYATKIQNIYRNIKNKRGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06358.1 unknown Not tested LEE Protein 6e-26 46
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 6e-25 46
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 6e-25 46
unnamed AAK26704.1 unknown Not tested LEE Protein 4e-25 46
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-25 46
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-25 46
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-25 46
unnamed AAC31524.1 L0045 Not tested LEE Protein 2e-24 44
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 2e-24 44
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 3e-24 44
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 3e-24 44
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 1e-22 43
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 3e-23 43
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 2e-13 41
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 2e-13 41
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 1e-12 41
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 8e-13 41
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 4e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_P2-0053 YP_002291202.1 hypothetical protein VFG0823 Protein 1e-24 44
ECSE_P2-0053 YP_002291202.1 hypothetical protein VFG0719 Protein 5e-23 43