|
Name : ECSE_P2-0002 (ECSE_P2-0002) Accession : YP_002291151.1 Strain : Genome accession: NC_011413 Putative virulence/resistance : Virulence Product : putative fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 795 - 3302 bp Length : 2508 bp Strand : + Note : - DNA sequence : ATGAAGTATTCTAAGCTGTTCCTGTCCGTTGGGTTGGCTTTGGTTACATTATCTGGTTGGGGGCGAACCTATACGTTTGA TCCTTCGTTAGTTGAAAGCAGTGGAGGTGATAGTGTAGATGTTTCATTATTTAATCAGGGTCTTCAATTGCCGGGAGAAT ACTTTGTTAGTATTTTCGTTAATGGTGAAAAGGTAGGCTCTGACAATATTAATTTTCGTATAGAAAATCATAATGGCGAA GATACATTATCACCGTGTTTGAACGCAGACCAGCTAACTAAGTATGGGATTGATATCCATAAATACTCAGATTTGTTTAA TGCTGGTCCAGAGCAATGTGCTAATTTATGGGCGATCCCGCAGGCTGATATTCAGTTTGATTTTAATCAGCAAAAACTTT CATTGCTTCTGCCAACGCAGGCTCTTTTACCGAAATTAAATGGAATTGCTCCTGAGCAATTGTGGGATGATGGTATTCCT GCATTGTTTATGAATTATCAAACGAATATGCAGCAAAGAGAATACCAGGGAGCCTATAAGTCGCATGACGAGTCATATTA TGCGCAGTTACAACCAGGACTGAATATTGGCCCCTGGCGTTTTCGTAGCGCCGCGTCATGGCAAAAGGAACAGGGCTGGC AACGTTCATATATCTATGCTGAGCGCGGGCTAAATACTATAAAAGGCCGTTTGACATTAGGGGAGTCATATTCTGATGGC AGTATCTTTGACAGTATTCCGTTTACTGGCGGAAAGCTGGCTTCAGATGAAACGATGCTCCCTTATGACCAATGGAGTTT TTCGCCAGTCATTCGTGGTGTGGCGCGTACACAGGCCAGAGTTGAGGTTCAGCAGAATGGTTACACCGTGAGTAATGACC TTATTCCATCAGGTCCTTTTGAATTAACAAACCTTCCTCTGGGAGGTGGAAGCGGTGACCTGAAAGTCATTGTTCATGAG AGTGACGGAACTCAACAAGTATTTACTGTTCCATATGACACGCCTGCCGTTGCATTACGACAGGGATATTTCGAATATTC GGTCATGGGAGGAGAGTATCGCCCTGCTAATGATGCCGTGCAAACGACACCTGTAGGTGCTCTTGAAATGAAGTACGGGT TACCGTGGAACCTCACACTATATGGAGGGCTTCAAGGGGCCGGTAATTACCAAGCTGCTGCTTTAGGAATCGGTTCTTTA TTAGGTGATTTTGGTGCTTTATCTGCTGATGTTGTTCAATCAAATAGCAAAAAGGATAATCAGCAAAAGGAAAGCGGTCA GCGTTGGCGTGTCAGATACAATAAATCGCTGGATAGTGGTACGTCGGTCAACATCGCAAGTGAGGAATATGCGACCGAAG GATTCAATACCTTGTCTGATACGTTAAATACGTATTGTAAGCCTGATGCCGGAAACATTTGTTACTCTGATTATAAGAAA CCCAAGAACAAGGTCAATCTTAGTATCAGTCAGACAACAGACGGTTGGGGAACTTTCAATTTCAATGGTTACCGACAAAA CTACTGGAATGATAAATCAACAACAACGTCTTTTACTGCTGGATATAGTCGGATGTTTGATAGCGGGATTTCTTTAAATG TTAATTTATCGAAAACCCAAAATATCGATAAAAACGGGAAGAAAACAAATGATCGGCTAACTAGCCTTTGGCTGAGTTTC CCTCTGAGTCGCTGGTTAAGTAATAGTTCGGTAAATGCAAACTATCAAATGACATCAGATACCCGAGGCGATTCCATGCA TGAGTTTGGGGTATACGGTGACGCATTTAATCGTCAACTACATTGGGATCTCCGGGAGCGTTATAGAGATAATGCTTCAG ATAATAAAGCATCCAGCGCGTTAAGTCTGAACTATCGTGGTACTTACGGAGAATTACGAGGCAATTATAGTTATGATAAA AAACAACGGCAGCTTGGTATAGGAATTAATGGAAATATTGTCGCTACTCAGTATGGAATAACAGCAGGACAAAGCTCGGG AGACACCATGGCATTAGTTCAGGCTCCGGGAGTAGATGGTGCTTCTGTAGGTTACTGGCCCGGTATGAAAACTGATTTCA GGGGATATACCAGTTATGGATATTTAACACCTTACCGGGAAAATAATATTGACATTAACCCGGTGACATTGCCAAAGAAT GCAGAGATATCGCAGACATCTACGCGTGTTGTTCCTACAAAAGGAGCCGTTGTTTTAGCTAAATTTGATACACGTATCGG TGGGCGACTGTTATTACAATTGAAACGTTCTGATAATAAGCCAGTACCTTTTGGCTCTGTTGCTACTGTTGAAGGCCAGG CATCCAGTTCTGGGATTGTTGGGGATAACAGTCAGGTATATTTAACAGGCGTTCCCAAAGAAGCTACTGTAAAGATTCAA TGGGGTAAAGATAAAACACAGTCATGTCATGCCAGAGTATTATTACCTGAAGATGTTAATACGACGGGAATATATAATTT AACAGCAGTATGTACTCTTAATGGTTAA Protein sequence : MKYSKLFLSVGLALVTLSGWGRTYTFDPSLVESSGGDSVDVSLFNQGLQLPGEYFVSIFVNGEKVGSDNINFRIENHNGE DTLSPCLNADQLTKYGIDIHKYSDLFNAGPEQCANLWAIPQADIQFDFNQQKLSLLLPTQALLPKLNGIAPEQLWDDGIP ALFMNYQTNMQQREYQGAYKSHDESYYAQLQPGLNIGPWRFRSAASWQKEQGWQRSYIYAERGLNTIKGRLTLGESYSDG SIFDSIPFTGGKLASDETMLPYDQWSFSPVIRGVARTQARVEVQQNGYTVSNDLIPSGPFELTNLPLGGGSGDLKVIVHE SDGTQQVFTVPYDTPAVALRQGYFEYSVMGGEYRPANDAVQTTPVGALEMKYGLPWNLTLYGGLQGAGNYQAAALGIGSL LGDFGALSADVVQSNSKKDNQQKESGQRWRVRYNKSLDSGTSVNIASEEYATEGFNTLSDTLNTYCKPDAGNICYSDYKK PKNKVNLSISQTTDGWGTFNFNGYRQNYWNDKSTTTSFTAGYSRMFDSGISLNVNLSKTQNIDKNGKKTNDRLTSLWLSF PLSRWLSNSSVNANYQMTSDTRGDSMHEFGVYGDAFNRQLHWDLRERYRDNASDNKASSALSLNYRGTYGELRGNYSYDK KQRQLGIGINGNIVATQYGITAGQSSGDTMALVQAPGVDGASVGYWPGMKTDFRGYTSYGYLTPYRENNIDINPVTLPKN AEISQTSTRVVPTKGAVVLAKFDTRIGGRLLLQLKRSDNKPVPFGSVATVEGQASSSGIVGDNSQVYLTGVPKEATVKIQ WGKDKTQSCHARVLLPEDVNTTGIYNLTAVCTLNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 6e-162 | 45 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 3e-163 | 45 |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 7e-173 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECSE_P2-0002 | YP_002291151.1 | putative fimbrial usher protein | VFG0419 | Protein | 0.0 | 71 |
| ECSE_P2-0002 | YP_002291151.1 | putative fimbrial usher protein | VFG0944 | Protein | 7e-169 | 46 |
| ECSE_P2-0002 | YP_002291151.1 | putative fimbrial usher protein | VFG0853 | Protein | 6e-169 | 45 |
| ECSE_P2-0002 | YP_002291151.1 | putative fimbrial usher protein | VFG0849 | Protein | 5e-153 | 44 |
| ECSE_P2-0002 | YP_002291151.1 | putative fimbrial usher protein | VFG0857 | Protein | 2e-157 | 43 |
