Gene Information

Name : ECSE_P2-0001 (ECSE_P2-0001)
Accession : YP_002291150.1
Strain :
Genome accession: NC_011413
Putative virulence/resistance : Virulence
Product : putative fimbrial chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1 - 765 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGTATAGAAAACTACAAATCTTAAATTGTGTCGCTTTGGGGTTAATTGCTTTTACTGTGAATGCAGCACCTTCAGA
TGTAACTGTTTCAGGCAAGCAGTATGGTGTGATTCTGGGGGGAAGCCGTGTCATCTATCCGTTAGATTCCAATGGTGCCG
TAGTTTCTGTGGATAATCCCCAGGATTATCCTGTTCTGATTCAGACTCGTGTTTTTGATGAGAATAAATCAGAGGCGGCT
CCTTTTGTCGTCACCCCACCTTTGTTCCGTTTGGATGCCAAACAACGGAGTTCTCTGCGCTTAACCCAGACCGGTGGCAG
TTTTTCTCGTGATAAAGAAAGCCTGCAATGGTTATGCGTGAAGGGTATTCCGCCGAAAGAGGATGACCTTTGGGTTGGCG
ATAAGGGAAAGGAAAAGAGCCCTGGCTCCGGTGTCGGAATTTCGTTACAAATTGCCATCGATAACTGTATCAAAATTATG
GTTCGCCCGAATGAACTTAAAGGAAATCCTTCTCAATTTGCCGGAGATTTGGTTTGGAAAATTGATGGGCAGAAATTAGT
TGCGGAGAACCTGACACCGTTTTATATGAATTTAGGAAAAGTTACTTTTAGTGGAAAAGAGGTTTTACCTCACTTTGTGC
CCCCGAAATCAAAGTGGATGTTTGATCTGCCAAAAGGAACTTCAGGGCAAGGTCATGTTTCCTGGCAAATCATTAATGAT
CAAGGGGGGCTAAGTCAGACATATTCGAAGAATGTAATTTTTTAA

Protein sequence : 
MKYRKLQILNCVALGLIAFTVNAAPSDVTVSGKQYGVILGGSRVIYPLDSNGAVVSVDNPQDYPVLIQTRVFDENKSEAA
PFVVTPPLFRLDAKQRSSLRLTQTGGSFSRDKESLQWLCVKGIPPKEDDLWVGDKGKEKSPGSGVGISLQIAIDNCIKIM
VRPNELKGNPSQFAGDLVWKIDGQKLVAENLTPFYMNLGKVTFSGKEVLPHFVPPKSKWMFDLPKGTSGQGHVSWQIIND
QGGLSQTYSKNVIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 8e-50 45
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 8e-50 45
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 6e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_P2-0001 YP_002291150.1 putative fimbrial chaperone VFG0420 Protein 2e-79 60
ECSE_P2-0001 YP_002291150.1 putative fimbrial chaperone VFG0943 Protein 6e-46 46