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Name : OCAR_4928 (OCAR_4928) Accession : YP_002287930.1 Strain : Oligotropha carboxidovorans OM5; ATCC 49405 Genome accession: NC_011386 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 898469 - 899479 bp Length : 1011 bp Strand : - Note : - DNA sequence : ATGGCTTCCCCTATCTCGCAGACGGCCCCGGATCACGCCGCGCCTCTTTCTCCCGCCGTCGATTCCGCGCTGCGCACACT CGCCTCGGAGGCCGATGGCGTCGCAGCGCTCGCGACCGCGCTGCGCACCACGCTGCGGCCCGCCTTCGACGACGCGATTG CGCTGATCCAGAACGCCAAGGGCCGCGTGATCGTCACCGGCCTCGGCAAGTCCGGTCATATCGGCCGCAAGATCGCCGCG ACCTTCGCCTCCACCGGCACGCCCTCCTTCTTCGTCCACGCCGCCGAGGCAAGCCATGGCGATCTCGGCATGATCACCGC CGATGACGTCATCATGGCGCTGTCGTGGTCCGGCGAAACGGCGGAGCTGCGCAACCTCATCACCTATTCGCGGCGCTTCC GCATCCAACTGATCGCGCTCACGTCCGATCCGGCTTCGACGCTCGGCAAGGCCGCCGACGTGGTGCTGGCGCTGCCGAAA GCGCCCGAGGCCTGTCCGAACAATCTCGCGCCGACGACGTCGTCGCTGATGCAGCTCGCGCTCGGCGATGCGATCGCGAT TGCGCTTCTCGAGGGTCGCGGCTTCACCGCGATCGATTTCAGCGTGCTGCATCCTTCCGGCAAGTTGGGCGCGATGCTCA AATTCGTGCGCGACCTGATGCACGAGAGCGCGTCCATTCCAGTGAAGCCGCTCGGCACGCCGATGTCGGATGCGCTGGTG GAGATGACCTCGAAGGGCTTCGGCTGCGTTGCCATTATCGACGGCCGCGGCGAGATCGCCGGCATCGTCACCGACGGCGA CCTGCGCCGTCACATGCGCCCGGACCTGATGACGGCGCGCGTCGATGATGTGATGACCCGAAATCCGAAGACCATCAGCC CCGATCTGCTCGCAAGCGAAGCGCTGGAAATCCTCAACAGCTCGAAGATCACGGCCTTGATCGTGACGCGCGGCAAGACG CCGGTCGGCATCGTGCACCTGCACGACATTTTGCGCGCGGGCGTGGCGTAA Protein sequence : MASPISQTAPDHAAPLSPAVDSALRTLASEADGVAALATALRTTLRPAFDDAIALIQNAKGRVIVTGLGKSGHIGRKIAA TFASTGTPSFFVHAAEASHGDLGMITADDVIMALSWSGETAELRNLITYSRRFRIQLIALTSDPASTLGKAADVVLALPK APEACPNNLAPTTSSLMQLALGDAIAIALLEGRGFTAIDFSVLHPSGKLGAMLKFVRDLMHESASIPVKPLGTPMSDALV EMTSKGFGCVAIIDGRGEIAGIVTDGDLRRHMRPDLMTARVDDVMTRNPKTISPDLLASEALEILNSSKITALIVTRGKT PVGIVHLHDILRAGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-44 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-44 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-44 | 45 |
