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Name : rplS (OCAR_4271) Accession : YP_002287285.1 Strain : Oligotropha carboxidovorans OM5; ATCC 49405 Genome accession: NC_011386 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 264511 - 264906 bp Length : 396 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAATCTCATTCAAGAGCTCGAGAAAGAGCAGCTCGACAAGCTCGCCACCGGGAAGACCATTCCCGATTTCGGCCCGGG CGACACCGTGACCGTCAACGTCAAGGTGAAGGAAGGCGACCGCACCCGCGTGCAGGCCTATGAAGGCGTCTGCATCGGCC GCAACGGCGGTGGCATCAACGAGAGCTTCACCGTGCGCAAGATTTCCTATGGCGAAGGCGTCGAGCGCGTCTTCCCGATC TATTCGCCGATGATCGACTCGATCAAGCTCGTGCGTCGCGGCAAGGTGCGTCGCGCCAAGCTGTATTACCTGCGCGGCCG TCGCGGCAAATCCGCCCGCATCGTCGAGAAGCAGGATCAGCGCCAGACGACGACGGCTGCTGCCGCTGCCGAGTAA Protein sequence : MNLIQELEKEQLDKLATGKTIPDFGPGDTVTVNVKVKEGDRTRVQAYEGVCIGRNGGGINESFTVRKISYGEGVERVFPI YSPMIDSIKLVRRGKVRRAKLYYLRGRRGKSARIVEKQDQRQTTTAAAAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-27 | 58 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 5e-25 | 56 |
