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Name : serS (OCAR_6264) Accession : YP_002289242.1 Strain : Oligotropha carboxidovorans OM5; ATCC 49405 Genome accession: NC_011386 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2207212 - 2208531 bp Length : 1320 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCATGACATTCGCTGGATTCGCGACAACCCGGAGGCTTTCGACGCCGCGCTGGGCCGGCGCGGACTTGAGCCTCAGGC GGCCGCGCTGATCGCGCTCGACGAGAAGCGGCGCGGTGCGATTGCCGCTTTCGAGCAGGCGCAGGCGCGACGCAACGCAG CCTCGAAGGAAATCGGGGAAGCCAAGAAGGCGAAGGAGAACGCTCGCGCCGATGCGCTGATGGCGGAAGTGGGTGAGCTC AAGACCAAGCTGCCGGAGATGGACGCGGCAGCAAAAAGGCTTGAGGAAGATCTGCGCAAGGAGCTTGCACAGATTCCGAA CCTTCCGCTCGCCGAAGTACCGGAGGGCGCCGACGAGCACGGCAACGTGCAGCATCACGTCTATGGTGAGCCGCGCAGCT ATGCGTTCAAGCCGAAGGAGCATGTCGCGCTCGGCGAAGGTCTCGGCTTCATGGATTTCGAACGGGCCGCGAAACTCTCC GGGGCGCGCTTTGTCGTGCTGAAGAGCGGACTGGCGCGGCTCGAGCGCGCCATCGGTCAATTTTTCCTCGACGTGCATAC CGGCGAACACGGCTACACTGAAGTGAACCCGCCGCTGCTGGTGCGCGACGATGCGATGTTTGGCACCGCGCAGTTGCCGA AGTTTCGGGAAGATCAATTCGCGGCCGGATCGCTGGACGCCGAAGGGCAAGGCTATTGGCTCATTCCCACCGCTGAGGTC CCGCTGACGAACCTTGTGCGTGAATCGATCCTCGACGAGAAAGAATTGCCGATGCGCTTGACCGCGCTGACGCCGTGCTT CCGTGCGGAAGCAGGTGCAGCCGGGCGCGATACGCGTGGCATGATCCGCCAGCATCAGTTCACCAAGGTCGAACTCGTTT CGATCACGACGCCTGATGAATCCAGGAACGAGCACGAGCGCATGCTCTCCTGCGCGGAAGAAGTGCTGAAGCGGCTCGGC CTGCATTATCGCGTGATGACGCTGTGCACCGGCGATATGGGCTTCGCGTCACAAAAGACCTACGACATCGAAGTATGGAT GCCGGGACAAATATCGAGTCAGGGCGAAGGCGGTATGTACCGCGAAATTTCATCGTGCTCAGTGTGCGGCGACTTCCAGG CGCGGCGCATGGATGCGCGCTATCGCGGACCCGACAACAAGCCGCACTTCGTGCATACGTTAAACGGTTCGGGTACGGCG GTTGGCCGCGCGCTGATCGCGGTGATGGAAACCTATCAGCAGGAAGACGGGTCGATCGCGGTGCCGGATGTGCTGCAGCC TTACATGGGCGGTCTGAAAGTGATTGAGCGGGACCGCTGA Protein sequence : MHDIRWIRDNPEAFDAALGRRGLEPQAAALIALDEKRRGAIAAFEQAQARRNAASKEIGEAKKAKENARADALMAEVGEL KTKLPEMDAAAKRLEEDLRKELAQIPNLPLAEVPEGADEHGNVQHHVYGEPRSYAFKPKEHVALGEGLGFMDFERAAKLS GARFVVLKSGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQFAAGSLDAEGQGYWLIPTAEV PLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPDESRNEHERMLSCAEEVLKRLG LHYRVMTLCTGDMGFASQKTYDIEVWMPGQISSQGEGGMYREISSCSVCGDFQARRMDARYRGPDNKPHFVHTLNGSGTA VGRALIAVMETYQQEDGSIAVPDVLQPYMGGLKVIERDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-94 | 49 |
