Gene Information

Name : OCAR_4020 (OCAR_4020)
Accession : YP_002287037.1
Strain : Oligotropha carboxidovorans OM5; ATCC 49405
Genome accession: NC_011386
Putative virulence/resistance : Resistance
Product : CadR
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 18219 - 18638 bp
Length : 420 bp
Strand : +
Note : -

DNA sequence : 
ATGACAGGCGATTTTCTCGCCATCGGCGAGTTGGGGCGAAAGACGGACACCAAGGTCGAGACGATCCGCTATTACGAGCG
GATTGGACTGCTTGCCGCGCCGCGCCGGACGCCGGGAAACTACCGGGCCTATGGTCCAGAGCACCTCAATCGGCTGAGCT
TCATCCGGCGTTCGCGAGATCTTGGGTTTTCGCTCGACCAGGTGCGCGCATTGCTCGGCCTGGCCGACCAGCGCGATCGA
TCTTGCGACGCCGTCGATGCAATCGCCAAAGAGCACCGAGCCGAGGTTGATCGAAAGATTGCCGACTTGCGCGCGCTGCG
TCGCGAACTCGACAGCATGATCGATCAGTGTCGCTGCGGCACGGTTGCCGACTGCCGGATCATCGAGGCGCTATCGCCGA
CGGCCCCAGCCGCTTCATAA

Protein sequence : 
MTGDFLAIGELGRKTDTKVETIRYYERIGLLAAPRRTPGNYRAYGPEHLNRLSFIRRSRDLGFSLDQVRALLGLADQRDR
SCDAVDAIAKEHRAEVDRKIADLRALRRELDSMIDQCRCGTVADCRIIEALSPTAPAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 8e-24 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCAR_4020 YP_002287037.1 CadR BAC0301 Protein 1e-20 45
OCAR_4020 YP_002287037.1 CadR BAC0058 Protein 4e-25 43
OCAR_4020 YP_002287037.1 CadR BAC0190 Protein 9e-28 42
OCAR_4020 YP_002287037.1 CadR BAC0569 Protein 1e-23 41