Gene Information

Name : glnA (OCAR_5901)
Accession : YP_002288890.1
Strain : Oligotropha carboxidovorans OM5; ATCC 49405
Genome accession: NC_011386
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1817254 - 1818663 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGAAGACCGCCCAAGACGTCCTGAAGGCCATCAAGGACAACGACGTGAAGTACGTCGACCTGCGTTTCACCGATCCGCG
GGGCAAGTGGCAGCACGTCACCTTCGACGTCTCGATGATCGACGAGGAAATCTTCACCGAAGGCACGATGTTCGACGGCT
CCTCGATCGCCGGCTGGAAGGCCATCAACGAGTCCGACATGACGCTGATGCCCGACCCGGTGACCGCGACAATCGACCCG
TTCTTCGCCGAGACCACGATGGTCATCACCTGCGACATTCTCGAGCCGTCGACCGGCCAGCCCTACAACCGCGATCCGCG
CGGCATCGCCCGGAAGGCCGAGGCGATGGTGAAGTCGATGGGCATCGGCGACACCGTCTATGTCGGCCCCGAAGCCGAGT
TTTTCGTGTTCGACGACGTGCGCTTCCAGACCACGCCCTACAACACCGGCTTCAAGCTCGACTCCTCGGAGCTTCCGACC
AATTCCGACACCGAATATGAGGGCGGCAACCTCGGCCACCGCATCCGCACCAAGGGCGGCTACTTCCCGGTGCCACCGCA
GGATTCGATCCAGGACATGCGCTCCGAGATGCTCGGCGCCATGGCCCGCATGGGCGTGAAGGTGGAGAAGCATCACCACG
AGGTCGCTTCCGCCCAGCACGAGCTCGGCATGAAGTTCGACACGCTGACCCACATGGCCGACCAGATGCAGATCTACAAG
TACTGCATCCATCAGGTCGCGCACATCTACGGCAAGACCGCCACCTTCATGCCGAAGCCGGTCTATGGCGACAACGGCTC
GGGCATGCATGTGCACCTGTCGATCTGGAAGGACGGCAAGCCTACCTTCGCCGGCAACAAGTATGCCGACCTGTCGGACA
CCTGCCTCCACTACATCGGCGGCATCATCAAGCACGCCAAGGCGATCAACGCCTTCACCAACCCGTCCACCAACTCCTAC
AAGCGTCTGGTGCCGGGCTATGAGGCTCCCGTGCTGCTCGCCTATTCGGCGCGCAACCGCTCGGCGTCCTGCCGCATCCC
CTACACGACGTCGCCGAAGGCAAAGCGCGTCGAGGTGCGCTTCCCCGATCCGACCGCCAATCCGTATCTCGCTTTCGCGG
CGATGCTGATGGCCGGCCTCGATGGCATCAAGAACAAGATCGATCCGGGCCCGGCGATGGACAAGGACCTTTACGATCTG
CCGAAGGAAGAGCTGAAGCAGATCCCGACCGTGTGCGGCTCGCTCCGCGAGGCGCTTGAGAACCTCGACAAGGACCGCGC
ATTCCTGAAGGCCGGCGGCGTGTTCGACGACGACTTCATCAACAGCTTCATCGAACTCAAGATGACCGAGGTCGAGCGCT
ACGAGATGACCCCTCATCCGGTCGAGTTCGAGCTTTACTACTCGCTGTAA

Protein sequence :
MKTAQDVLKAIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFTEGTMFDGSSIAGWKAINESDMTLMPDPVTATIDP
FFAETTMVITCDILEPSTGQPYNRDPRGIARKAEAMVKSMGIGDTVYVGPEAEFFVFDDVRFQTTPYNTGFKLDSSELPT
NSDTEYEGGNLGHRIRTKGGYFPVPPQDSIQDMRSEMLGAMARMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYK
YCIHQVAHIYGKTATFMPKPVYGDNGSGMHVHLSIWKDGKPTFAGNKYADLSDTCLHYIGGIIKHAKAINAFTNPSTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPYTTSPKAKRVEVRFPDPTANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDL
PKEELKQIPTVCGSLREALENLDKDRAFLKAGGVFDDDFINSFIELKMTEVERYEMTPHPVEFELYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-109 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_002288890.1 glutamine synthetase, type I VFG1399 Protein 3e-109 53