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Name : kdpB (OCAR_4176) Accession : YP_002287190.1 Strain : Oligotropha carboxidovorans OM5; ATCC 49405 Genome accession: NC_011386 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 180900 - 182969 bp Length : 2070 bp Strand : + Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGAACCAGTCCAAATCCGCGAGCATGCTGGACGCTCGCATACTCGTACCGGCCATTGGCGATGCTTTCAGGAAACTGAA TCCGAAGAGCCTCGCCAAGAACCCCGTTATGTTCGTAGTCGCCGTGGTGTCAGTCCTCACGACGGCGCTGCTCTTGAAAG ACATCATGACCGGGGCCGAAAATGTCGGCTTCTCGCTGCAGATCGTGTTGTGGCTGTGGTTCACGGTTCTCTTCGCCAAC TTTGCCGAAGCCGTCGCCGAAGGGCGCGGCAAGGCGCAGGCGGAATCGCTTCGGCGCACCCGCAGCGAGACCCAGGCCAA GCTGCTCTCGAACGGCGGTTCCGACTACAAAATGGTGCCTGGCGCAACGCTGAAGGTCGGTGACGTTGTTCTGGTGGAAC CCGGCGACATCATCCCCTCTGATGGCGAAGTCATCGAGGGTGTCTCCTCGGTGAACGAAGCCGCGATCACCGGCGAATCG GCCCCGGTGATCCGCGAATCTGGCGGCGACCGCTCTGCTGTCACGGGCGGCACGCAGGTGCTTTCCGACTGGATCAAGGT CCGGATCACGGCCGCGGCGGGTTCGACCTTCATCGACAAGATGATCGCTCTCGTCGAAGGCGCCGAGCGCCAGAAGACGC CGAACGAAATCGCGCTCAATATCCTGCTCGCGGGCATGACGTTGATCTTCGTGCTGGCGGTCGTGACCATTCCGAGCTTT GCTGCCTATTCCGGCGGCGTGGTTCCGGTGATCGTGCTCGTTGCCCTGTTCGTCACCCTCATCCCCACGACCATCGGCGC GCTGCTGTCTGCTATCGGCATCGCGGGTATGGACCGGCTGGTGCGCTTCAATGTCCTGGCCATGTCCGGCCGTGCTGTGG AAGCCGCCGGCGACGTCGACACGTTGCTGCTCGATAAGACCGGCACCATCACGCTCGGCAACCGCCAGGCAAGCGAGTTC CGGCCGGTCCGCGGCGTCACCGAGAAGGAGCTGGCCGACGCGGCGCAGCTAGCCTCGCTGGCTGACGAGACGCCGGAAGG CCGATCGATCGTCGTGCTCGCCAAGGAAAAATACGGCATCCGCGCACGCGACATGGCGAGCCTCAAAGCGACTTTCGTTC CGTTCACGGCGCAGACCCGTATGAGCGGCGTCGACCTGGACGGTTCGACCATCCGCAAGGGCGCGGTCGATGCGGTTCTG AAGCACGTGGAACTCGCCACGGTCGCAACCGGCACCCCGCGTGCGTCCACTGAAAGCGTTCGTGAGCTTCAGGGCATCGC CGACCAGATCGCCAAGGCAGGCGGCACGCCGCTCGCTGTGGTGAAGGATGGCCGCCTGCTCGGGGTCATCTATCTCAAGG ACATCGTCAAGGGCGGCATCAAGGAGCGGTTCGCCGAGCTGCGCCGCATGGGCATTCGCACGGTGATGATCACCGGCGAC AACCCGATGACCGCGGCGGCTATCGCTGCCGAAGCCGGTGTCGACGACTTCCTGGCGCAAGCGACGCCCGAGAACAAGCT GGCGCTAATCCGCGAGGAACAGGCCAAGGGCAAGCTGGTCGCCATGTGCGGCGACGGCACCAATGACGCCCCGGCGCTCG CCCAGGCGGATGTCGGCGTCGCCATGAACACCGGCACGGTCGCCGCCCGCGAGGCTGGCAACATGGTGGATCTCGACAGC GATCCGACCAAGCTGATCGAAATCGTGGAAATCGGTAAGCAGTTGCTGATGACGCGCGGCGCGCTGACGACGTTCTCGAT CGCCAACGATATTGCGAAGTATTTCGCGATCATCCCGGCGATGTTCCTCGTCTTCTATCCGCAGCTCGGTGCGCTTAACA TCATGGGCCTCGCTTCGCCCCAGAGCGCGATCCTGTCGGCGATCATTTTCAACGCTCTCATCATCGTGGCGCTGATCCCG CTGTCGTTGAAAGGCGTCAAGTATCGCGCCATCGGAGCGGGTTCGCTGTTGTCCCGAAACCTCCTGATTTACGGCCTGGG CGGCATCCTTGTCCCCTTCGCCGGCATCAAACTCATCGACATGGCGATCACCGCCGTCGGTCTCGCCTAA Protein sequence : MNQSKSASMLDARILVPAIGDAFRKLNPKSLAKNPVMFVVAVVSVLTTALLLKDIMTGAENVGFSLQIVLWLWFTVLFAN FAEAVAEGRGKAQAESLRRTRSETQAKLLSNGGSDYKMVPGATLKVGDVVLVEPGDIIPSDGEVIEGVSSVNEAAITGES APVIRESGGDRSAVTGGTQVLSDWIKVRITAAAGSTFIDKMIALVEGAERQKTPNEIALNILLAGMTLIFVLAVVTIPSF AAYSGGVVPVIVLVALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF RPVRGVTEKELADAAQLASLADETPEGRSIVVLAKEKYGIRARDMASLKATFVPFTAQTRMSGVDLDGSTIRKGAVDAVL KHVELATVATGTPRASTESVRELQGIADQIAKAGGTPLAVVKDGRLLGVIYLKDIVKGGIKERFAELRRMGIRTVMITGD NPMTAAAIAAEAGVDDFLAQATPENKLALIREEQAKGKLVAMCGDGTNDAPALAQADVGVAMNTGTVAAREAGNMVDLDS DPTKLIEIVEIGKQLLMTRGALTTFSIANDIAKYFAIIPAMFLVFYPQLGALNIMGLASPQSAILSAIIFNALIIVALIP LSLKGVKYRAIGAGSLLSRNLLIYGLGGILVPFAGIKLIDMAITAVGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-173 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 9e-174 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 9e-150 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-149 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-149 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 5e-149 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-149 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-149 | 54 |
